Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
EFCAB3Q8N7B9 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
EFCAB3Q8N7B9 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.25■□□□□ 0.19
EFCAB3Q8N7B9 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
EFCAB3Q8N7B9 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
EFCAB3Q8N7B9 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
EFCAB3Q8N7B9 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
EFCAB3Q8N7B9 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
EFCAB3Q8N7B9 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
EFCAB3Q8N7B9 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
EFCAB3Q8N7B9 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.25■□□□□ 0.19
EFCAB3Q8N7B9 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
EFCAB3Q8N7B9 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
EFCAB3Q8N7B9 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
EFCAB3Q8N7B9 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
EFCAB3Q8N7B9 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
EFCAB3Q8N7B9 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
EFCAB3Q8N7B9 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
EFCAB3Q8N7B9 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.25■□□□□ 0.19
EFCAB3Q8N7B9 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.25■□□□□ 0.19
EFCAB3Q8N7B9 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
EFCAB3Q8N7B9 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.25■□□□□ 0.19
EFCAB3Q8N7B9 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC16.25■□□□□ 0.19
EFCAB3Q8N7B9 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC16.25■□□□□ 0.19
EFCAB3Q8N7B9 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.25■□□□□ 0.19
EFCAB3Q8N7B9 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC16.25■□□□□ 0.19
EFCAB3Q8N7B9 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
EFCAB3Q8N7B9 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.25■□□□□ 0.19
EFCAB3Q8N7B9 AC005593.1-201ENST00000624894 515 ntBASIC16.25■□□□□ 0.19
EFCAB3Q8N7B9 PGM5P2-202ENST00000637225 1043 ntBASIC16.25■□□□□ 0.19
EFCAB3Q8N7B9 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.25■□□□□ 0.19
EFCAB3Q8N7B9 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
EFCAB3Q8N7B9 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
EFCAB3Q8N7B9 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
EFCAB3Q8N7B9 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
EFCAB3Q8N7B9 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
EFCAB3Q8N7B9 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.25■□□□□ 0.19
EFCAB3Q8N7B9 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
EFCAB3Q8N7B9 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
EFCAB3Q8N7B9 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
EFCAB3Q8N7B9 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
EFCAB3Q8N7B9 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
EFCAB3Q8N7B9 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
EFCAB3Q8N7B9 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
EFCAB3Q8N7B9 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
EFCAB3Q8N7B9 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
EFCAB3Q8N7B9 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
EFCAB3Q8N7B9 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
EFCAB3Q8N7B9 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
EFCAB3Q8N7B9 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.24■□□□□ 0.19
EFCAB3Q8N7B9 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.24■□□□□ 0.19
EFCAB3Q8N7B9 AP002414.3-201ENST00000589352 1468 ntBASIC16.24■□□□□ 0.19
EFCAB3Q8N7B9 PRAL-201ENST00000624952 3286 ntBASIC16.24■□□□□ 0.19
EFCAB3Q8N7B9 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.24■□□□□ 0.19
EFCAB3Q8N7B9 AL603832.2-201ENST00000566195 2125 ntBASIC16.24■□□□□ 0.19
EFCAB3Q8N7B9 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
EFCAB3Q8N7B9 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.24■□□□□ 0.19
EFCAB3Q8N7B9 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.24■□□□□ 0.19
EFCAB3Q8N7B9 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.24■□□□□ 0.19
EFCAB3Q8N7B9 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
EFCAB3Q8N7B9 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
EFCAB3Q8N7B9 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
EFCAB3Q8N7B9 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
EFCAB3Q8N7B9 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.24■□□□□ 0.19
EFCAB3Q8N7B9 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC16.24■□□□□ 0.19
EFCAB3Q8N7B9 AP006288.1-201ENST00000446065 395 ntBASIC16.24■□□□□ 0.19
EFCAB3Q8N7B9 LYRM2-204ENST00000520441 791 ntTSL 3 BASIC16.24■□□□□ 0.19
EFCAB3Q8N7B9 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.24■□□□□ 0.19
EFCAB3Q8N7B9 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
EFCAB3Q8N7B9 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.24■□□□□ 0.19
EFCAB3Q8N7B9 AC006557.2-201ENST00000592985 1240 ntBASIC16.24■□□□□ 0.19
EFCAB3Q8N7B9 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.24■□□□□ 0.19
EFCAB3Q8N7B9 AC097655.1-201ENST00000635075 318 ntBASIC16.24■□□□□ 0.19
EFCAB3Q8N7B9 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.24■□□□□ 0.19
EFCAB3Q8N7B9 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
EFCAB3Q8N7B9 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
EFCAB3Q8N7B9 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.24■□□□□ 0.19
EFCAB3Q8N7B9 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.24■□□□□ 0.19
EFCAB3Q8N7B9 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
EFCAB3Q8N7B9 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
EFCAB3Q8N7B9 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
EFCAB3Q8N7B9 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
EFCAB3Q8N7B9 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
EFCAB3Q8N7B9 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
EFCAB3Q8N7B9 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
EFCAB3Q8N7B9 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
EFCAB3Q8N7B9 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
EFCAB3Q8N7B9 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
EFCAB3Q8N7B9 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
EFCAB3Q8N7B9 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.24■□□□□ 0.19
EFCAB3Q8N7B9 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.24■□□□□ 0.19
EFCAB3Q8N7B9 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.24■□□□□ 0.19
EFCAB3Q8N7B9 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
EFCAB3Q8N7B9 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
EFCAB3Q8N7B9 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
EFCAB3Q8N7B9 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.23■□□□□ 0.19
EFCAB3Q8N7B9 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.23■□□□□ 0.19
EFCAB3Q8N7B9 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
EFCAB3Q8N7B9 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
EFCAB3Q8N7B9 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms