Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
RPS3AP61247 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
RPS3AP61247 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RPS3AP61247 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.21■□□□□ 0.03
RPS3AP61247 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RPS3AP61247 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.21■□□□□ 0.03
RPS3AP61247 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.21■□□□□ 0.03
RPS3AP61247 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.21■□□□□ 0.03
RPS3AP61247 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.21■□□□□ 0.03
RPS3AP61247 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.21■□□□□ 0.03
RPS3AP61247 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.21■□□□□ 0.03
RPS3AP61247 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.21■□□□□ 0.03
RPS3AP61247 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
RPS3AP61247 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.21■□□□□ 0.03
RPS3AP61247 AC010491.1-201ENST00000563101 2797 ntBASIC15.21■□□□□ 0.03
RPS3AP61247 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.21■□□□□ 0.03
RPS3AP61247 FLJ16779-201ENST00000612722 7638 ntBASIC15.21■□□□□ 0.03
RPS3AP61247 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.21■□□□□ 0.02
RPS3AP61247 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
RPS3AP61247 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RPS3AP61247 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RPS3AP61247 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
RPS3AP61247 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RPS3AP61247 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RPS3AP61247 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.2■□□□□ 0.02
RPS3AP61247 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.2■□□□□ 0.02
RPS3AP61247 TUBB8P12-201ENST00000308911 1335 ntBASIC15.2■□□□□ 0.02
RPS3AP61247 TUBB7P-202ENST00000428444 1305 ntBASIC15.2■□□□□ 0.02
RPS3AP61247 TUBB8P7-204ENST00000567960 1332 ntBASIC15.2■□□□□ 0.02
RPS3AP61247 ME2P1-201ENST00000426028 1970 ntBASIC15.2■□□□□ 0.02
RPS3AP61247 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.2■□□□□ 0.02
RPS3AP61247 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RPS3AP61247 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.2■□□□□ 0.02
RPS3AP61247 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RPS3AP61247 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RPS3AP61247 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RPS3AP61247 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RPS3AP61247 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.2■□□□□ 0.02
RPS3AP61247 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
RPS3AP61247 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.2■□□□□ 0.02
RPS3AP61247 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.2■□□□□ 0.02
RPS3AP61247 KRT19P2-202ENST00000557173 1012 ntBASIC15.2■□□□□ 0.02
RPS3AP61247 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
RPS3AP61247 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.2■□□□□ 0.02
RPS3AP61247 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RPS3AP61247 AP001350.2-201ENST00000625104 1094 ntBASIC15.2■□□□□ 0.02
RPS3AP61247 AL645728.2-201ENST00000641974 660 ntBASIC15.2■□□□□ 0.02
RPS3AP61247 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
RPS3AP61247 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RPS3AP61247 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
RPS3AP61247 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RPS3AP61247 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RPS3AP61247 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RPS3AP61247 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
RPS3AP61247 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RPS3AP61247 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RPS3AP61247 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.2■□□□□ 0.02
RPS3AP61247 TOP3BP1-201ENST00000420768 1380 ntBASIC15.2■□□□□ 0.02
RPS3AP61247 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
RPS3AP61247 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
RPS3AP61247 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
RPS3AP61247 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RPS3AP61247 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
RPS3AP61247 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
RPS3AP61247 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.2■□□□□ 0.02
RPS3AP61247 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.2■□□□□ 0.02
RPS3AP61247 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RPS3AP61247 AL353732.1-201ENST00000569618 1459 ntBASIC15.2■□□□□ 0.02
RPS3AP61247 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RPS3AP61247 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
RPS3AP61247 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RPS3AP61247 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
RPS3AP61247 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RPS3AP61247 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.19■□□□□ 0.02
RPS3AP61247 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.19■□□□□ 0.02
RPS3AP61247 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.19■□□□□ 0.02
RPS3AP61247 AC025580.3-201ENST00000617932 1424 ntBASIC15.19■□□□□ 0.02
RPS3AP61247 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
RPS3AP61247 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RPS3AP61247 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RPS3AP61247 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RPS3AP61247 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RPS3AP61247 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.19■□□□□ 0.02
RPS3AP61247 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.19■□□□□ 0.02
RPS3AP61247 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
RPS3AP61247 AC005089.1-201ENST00000619486 2241 ntBASIC15.19■□□□□ 0.02
RPS3AP61247 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RPS3AP61247 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RPS3AP61247 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RPS3AP61247 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
RPS3AP61247 YBX2P1-201ENST00000394192 760 ntBASIC15.19■□□□□ 0.02
RPS3AP61247 MCCD1P2-201ENST00000423228 335 ntBASIC15.19■□□□□ 0.02
RPS3AP61247 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.19■□□□□ 0.02
RPS3AP61247 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.19■□□□□ 0.02
RPS3AP61247 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RPS3AP61247 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.19■□□□□ 0.02
RPS3AP61247 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.19■□□□□ 0.02
RPS3AP61247 PDPK2P-202ENST00000562415 1191 ntBASIC15.19■□□□□ 0.02
RPS3AP61247 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.19■□□□□ 0.02
RPS3AP61247 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms