Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 REXO1L1P-202ENST00000608646 1974 ntBASIC14.85□□□□□ -0.03
NKX2-2O95096 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NKX2-2O95096 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.85□□□□□ -0.03
NKX2-2O95096 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.85□□□□□ -0.03
NKX2-2O95096 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NKX2-2O95096 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.85□□□□□ -0.03
NKX2-2O95096 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NKX2-2O95096 KRT8P37-201ENST00000451609 1420 ntBASIC14.85□□□□□ -0.03
NKX2-2O95096 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.85□□□□□ -0.03
NKX2-2O95096 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.85□□□□□ -0.03
NKX2-2O95096 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NKX2-2O95096 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NKX2-2O95096 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NKX2-2O95096 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.85□□□□□ -0.03
NKX2-2O95096 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NKX2-2O95096 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NKX2-2O95096 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NKX2-2O95096 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NKX2-2O95096 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
NKX2-2O95096 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.85□□□□□ -0.03
NKX2-2O95096 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.85□□□□□ -0.03
NKX2-2O95096 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
NKX2-2O95096 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NKX2-2O95096 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.85□□□□□ -0.03
NKX2-2O95096 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.85□□□□□ -0.03
NKX2-2O95096 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC14.85□□□□□ -0.03
NKX2-2O95096 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.85□□□□□ -0.03
NKX2-2O95096 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NKX2-2O95096 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.85□□□□□ -0.03
NKX2-2O95096 AC003101.2-201ENST00000612557 442 ntBASIC14.85□□□□□ -0.03
NKX2-2O95096 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.85□□□□□ -0.03
NKX2-2O95096 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NKX2-2O95096 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NKX2-2O95096 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NKX2-2O95096 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NKX2-2O95096 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.85□□□□□ -0.03
NKX2-2O95096 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NKX2-2O95096 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.85□□□□□ -0.03
NKX2-2O95096 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NKX2-2O95096 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
NKX2-2O95096 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
NKX2-2O95096 PAUPAR-201ENST00000630360 2965 ntBASIC14.85□□□□□ -0.03
NKX2-2O95096 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NKX2-2O95096 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NKX2-2O95096 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NKX2-2O95096 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NKX2-2O95096 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
NKX2-2O95096 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.84□□□□□ -0.03
NKX2-2O95096 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NKX2-2O95096 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
NKX2-2O95096 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NKX2-2O95096 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NKX2-2O95096 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.84□□□□□ -0.03
NKX2-2O95096 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
NKX2-2O95096 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NKX2-2O95096 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.84□□□□□ -0.03
NKX2-2O95096 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NKX2-2O95096 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NKX2-2O95096 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NKX2-2O95096 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
NKX2-2O95096 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NKX2-2O95096 SPDYE7P-202ENST00000420373 878 ntBASIC14.84□□□□□ -0.03
NKX2-2O95096 HLA-J-203ENST00000494367 1087 ntBASIC14.84□□□□□ -0.03
NKX2-2O95096 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC14.84□□□□□ -0.03
NKX2-2O95096 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.84□□□□□ -0.03
NKX2-2O95096 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.84□□□□□ -0.03
NKX2-2O95096 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NKX2-2O95096 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
NKX2-2O95096 AC079781.4-201ENST00000641908 219 ntBASIC14.84□□□□□ -0.03
NKX2-2O95096 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NKX2-2O95096 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NKX2-2O95096 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
NKX2-2O95096 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
NKX2-2O95096 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NKX2-2O95096 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC14.84□□□□□ -0.03
NKX2-2O95096 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC14.84□□□□□ -0.03
NKX2-2O95096 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NKX2-2O95096 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.84□□□□□ -0.03
NKX2-2O95096 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.84□□□□□ -0.03
NKX2-2O95096 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
NKX2-2O95096 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.84□□□□□ -0.03
NKX2-2O95096 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
NKX2-2O95096 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
NKX2-2O95096 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
NKX2-2O95096 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NKX2-2O95096 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
NKX2-2O95096 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
NKX2-2O95096 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
NKX2-2O95096 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NKX2-2O95096 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NKX2-2O95096 AL035456.1-201ENST00000456064 1369 ntBASIC14.84□□□□□ -0.03
NKX2-2O95096 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NKX2-2O95096 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.84□□□□□ -0.03
NKX2-2O95096 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
NKX2-2O95096 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NKX2-2O95096 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NKX2-2O95096 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NKX2-2O95096 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
NKX2-2O95096 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.83□□□□□ -0.03
NKX2-2O95096 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms