Protein–RNA interactions for Protein: A6NCL2

LRCOL1, Leucine-rich colipase-like protein 1, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCOL1A6NCL2 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
LRCOL1A6NCL2 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LRCOL1A6NCL2 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC10.88□□□□□ -0.67
LRCOL1A6NCL2 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC10.88□□□□□ -0.67
LRCOL1A6NCL2 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC10.88□□□□□ -0.67
LRCOL1A6NCL2 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
LRCOL1A6NCL2 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC10.88□□□□□ -0.67
LRCOL1A6NCL2 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
LRCOL1A6NCL2 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LRCOL1A6NCL2 AC073439.1-201ENST00000624121 1774 ntBASIC10.88□□□□□ -0.67
LRCOL1A6NCL2 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LRCOL1A6NCL2 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LRCOL1A6NCL2 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LRCOL1A6NCL2 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
LRCOL1A6NCL2 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LRCOL1A6NCL2 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
LRCOL1A6NCL2 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LRCOL1A6NCL2 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LRCOL1A6NCL2 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
LRCOL1A6NCL2 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
LRCOL1A6NCL2 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LRCOL1A6NCL2 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
LRCOL1A6NCL2 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
LRCOL1A6NCL2 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC10.88□□□□□ -0.67
LRCOL1A6NCL2 KLF2P3-201ENST00000451977 1087 ntBASIC10.88□□□□□ -0.67
LRCOL1A6NCL2 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC10.88□□□□□ -0.67
LRCOL1A6NCL2 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC10.88□□□□□ -0.67
LRCOL1A6NCL2 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
LRCOL1A6NCL2 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LRCOL1A6NCL2 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC10.88□□□□□ -0.67
LRCOL1A6NCL2 DUX4L27-201ENST00000554796 1261 ntBASIC10.88□□□□□ -0.67
LRCOL1A6NCL2 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC10.88□□□□□ -0.67
LRCOL1A6NCL2 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LRCOL1A6NCL2 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LRCOL1A6NCL2 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LRCOL1A6NCL2 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC10.88□□□□□ -0.67
LRCOL1A6NCL2 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LRCOL1A6NCL2 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC10.88□□□□□ -0.67
LRCOL1A6NCL2 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LRCOL1A6NCL2 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC10.88□□□□□ -0.67
LRCOL1A6NCL2 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LRCOL1A6NCL2 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LRCOL1A6NCL2 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LRCOL1A6NCL2 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
LRCOL1A6NCL2 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LRCOL1A6NCL2 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
LRCOL1A6NCL2 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LRCOL1A6NCL2 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LRCOL1A6NCL2 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LRCOL1A6NCL2 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LRCOL1A6NCL2 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LRCOL1A6NCL2 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC10.88□□□□□ -0.67
LRCOL1A6NCL2 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LRCOL1A6NCL2 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
LRCOL1A6NCL2 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC10.88□□□□□ -0.67
LRCOL1A6NCL2 UBALD1-205ENST00000590891 2641 ntBASIC10.88□□□□□ -0.67
LRCOL1A6NCL2 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LRCOL1A6NCL2 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LRCOL1A6NCL2 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
LRCOL1A6NCL2 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LRCOL1A6NCL2 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LRCOL1A6NCL2 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LRCOL1A6NCL2 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LRCOL1A6NCL2 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
LRCOL1A6NCL2 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
LRCOL1A6NCL2 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LRCOL1A6NCL2 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC10.87□□□□□ -0.67
LRCOL1A6NCL2 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LRCOL1A6NCL2 AL662844.4-201ENST00000606367 2838 ntBASIC10.87□□□□□ -0.67
LRCOL1A6NCL2 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC10.87□□□□□ -0.67
LRCOL1A6NCL2 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC10.87□□□□□ -0.67
LRCOL1A6NCL2 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
LRCOL1A6NCL2 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC10.87□□□□□ -0.67
LRCOL1A6NCL2 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
LRCOL1A6NCL2 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC10.87□□□□□ -0.67
LRCOL1A6NCL2 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
LRCOL1A6NCL2 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC10.87□□□□□ -0.67
LRCOL1A6NCL2 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
LRCOL1A6NCL2 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
LRCOL1A6NCL2 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LRCOL1A6NCL2 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
LRCOL1A6NCL2 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LRCOL1A6NCL2 WRB-204ENST00000398753 699 ntTSL 3 BASIC10.87□□□□□ -0.67
LRCOL1A6NCL2 PP14571-201ENST00000404327 934 ntTSL 2 BASIC10.87□□□□□ -0.67
LRCOL1A6NCL2 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC10.87□□□□□ -0.67
LRCOL1A6NCL2 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC10.87□□□□□ -0.67
LRCOL1A6NCL2 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC10.87□□□□□ -0.67
LRCOL1A6NCL2 QPRT-203ENST00000562473 579 ntTSL 3 BASIC10.87□□□□□ -0.67
LRCOL1A6NCL2 RARRES2P9-201ENST00000565168 469 ntBASIC10.87□□□□□ -0.67
LRCOL1A6NCL2 AC005498.2-205ENST00000593218 784 ntBASIC10.87□□□□□ -0.67
LRCOL1A6NCL2 MIR6080-201ENST00000617359 66 ntBASIC10.87□□□□□ -0.67
LRCOL1A6NCL2 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LRCOL1A6NCL2 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
LRCOL1A6NCL2 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC10.87□□□□□ -0.67
LRCOL1A6NCL2 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LRCOL1A6NCL2 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC10.87□□□□□ -0.67
LRCOL1A6NCL2 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
LRCOL1A6NCL2 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LRCOL1A6NCL2 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
LRCOL1A6NCL2 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms