Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RCL1Q9Y2P8 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RCL1Q9Y2P8 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
RCL1Q9Y2P8 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RCL1Q9Y2P8 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RCL1Q9Y2P8 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RCL1Q9Y2P8 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RCL1Q9Y2P8 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RCL1Q9Y2P8 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.27□□□□□ -0.28
RCL1Q9Y2P8 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
RCL1Q9Y2P8 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RCL1Q9Y2P8 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
RCL1Q9Y2P8 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.27□□□□□ -0.28
RCL1Q9Y2P8 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
RCL1Q9Y2P8 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
RCL1Q9Y2P8 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RCL1Q9Y2P8 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
RCL1Q9Y2P8 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
RCL1Q9Y2P8 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.27□□□□□ -0.28
RCL1Q9Y2P8 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RCL1Q9Y2P8 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RCL1Q9Y2P8 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RCL1Q9Y2P8 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC13.27□□□□□ -0.28
RCL1Q9Y2P8 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RCL1Q9Y2P8 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
RCL1Q9Y2P8 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
RCL1Q9Y2P8 POR-201ENST00000394893 2532 ntTSL 5 BASIC13.27□□□□□ -0.29
RCL1Q9Y2P8 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RCL1Q9Y2P8 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RCL1Q9Y2P8 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC13.27□□□□□ -0.29
RCL1Q9Y2P8 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC13.27□□□□□ -0.29
RCL1Q9Y2P8 CDK2AP2P3-201ENST00000422476 372 ntBASIC13.27□□□□□ -0.29
RCL1Q9Y2P8 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC13.27□□□□□ -0.29
RCL1Q9Y2P8 PMS2P1-201ENST00000431037 1228 ntBASIC13.27□□□□□ -0.29
RCL1Q9Y2P8 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RCL1Q9Y2P8 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RCL1Q9Y2P8 MINOS1P3-201ENST00000457048 203 ntBASIC13.27□□□□□ -0.29
RCL1Q9Y2P8 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.29
RCL1Q9Y2P8 NTF6B-201ENST00000591913 560 ntBASIC13.27□□□□□ -0.29
RCL1Q9Y2P8 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
RCL1Q9Y2P8 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC13.27□□□□□ -0.29
RCL1Q9Y2P8 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
RCL1Q9Y2P8 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RCL1Q9Y2P8 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC13.27□□□□□ -0.29
RCL1Q9Y2P8 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
RCL1Q9Y2P8 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
RCL1Q9Y2P8 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
RCL1Q9Y2P8 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RCL1Q9Y2P8 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RCL1Q9Y2P8 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RCL1Q9Y2P8 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RCL1Q9Y2P8 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RCL1Q9Y2P8 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC13.27□□□□□ -0.29
RCL1Q9Y2P8 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC13.27□□□□□ -0.29
RCL1Q9Y2P8 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13.27□□□□□ -0.29
RCL1Q9Y2P8 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RCL1Q9Y2P8 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC13.27□□□□□ -0.29
RCL1Q9Y2P8 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RCL1Q9Y2P8 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC13.27□□□□□ -0.29
RCL1Q9Y2P8 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RCL1Q9Y2P8 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
RCL1Q9Y2P8 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
RCL1Q9Y2P8 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.27□□□□□ -0.29
RCL1Q9Y2P8 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC13.27□□□□□ -0.29
RCL1Q9Y2P8 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RCL1Q9Y2P8 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.27□□□□□ -0.29
RCL1Q9Y2P8 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.27□□□□□ -0.29
RCL1Q9Y2P8 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RCL1Q9Y2P8 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
RCL1Q9Y2P8 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RCL1Q9Y2P8 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RCL1Q9Y2P8 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RCL1Q9Y2P8 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
RCL1Q9Y2P8 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
RCL1Q9Y2P8 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
RCL1Q9Y2P8 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RCL1Q9Y2P8 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RCL1Q9Y2P8 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RCL1Q9Y2P8 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RCL1Q9Y2P8 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RCL1Q9Y2P8 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC13.26□□□□□ -0.29
RCL1Q9Y2P8 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC13.26□□□□□ -0.29
RCL1Q9Y2P8 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.26□□□□□ -0.29
RCL1Q9Y2P8 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
RCL1Q9Y2P8 AC087163.2-201ENST00000457299 853 ntBASIC13.26□□□□□ -0.29
RCL1Q9Y2P8 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.26□□□□□ -0.29
RCL1Q9Y2P8 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC13.26□□□□□ -0.29
RCL1Q9Y2P8 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC13.26□□□□□ -0.29
RCL1Q9Y2P8 AC233702.3-201ENST00000578656 1387 ntBASIC13.26□□□□□ -0.29
RCL1Q9Y2P8 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
RCL1Q9Y2P8 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RCL1Q9Y2P8 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RCL1Q9Y2P8 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC13.26□□□□□ -0.29
RCL1Q9Y2P8 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC13.26□□□□□ -0.29
RCL1Q9Y2P8 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RCL1Q9Y2P8 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RCL1Q9Y2P8 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC13.26□□□□□ -0.29
RCL1Q9Y2P8 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RCL1Q9Y2P8 AC114341.1-201ENST00000618070 349 ntBASIC13.26□□□□□ -0.29
RCL1Q9Y2P8 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms