Protein–RNA interactions for Protein: Q9UM07

PADI4, Protein-arginine deiminase type-4, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PADI4Q9UM07 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.22■□□□□ 0.19
PADI4Q9UM07 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PADI4Q9UM07 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PADI4Q9UM07 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
PADI4Q9UM07 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.22■□□□□ 0.19
PADI4Q9UM07 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.22■□□□□ 0.19
PADI4Q9UM07 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PADI4Q9UM07 TREML5P-201ENST00000421694 576 ntBASIC16.22■□□□□ 0.19
PADI4Q9UM07 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.22■□□□□ 0.19
PADI4Q9UM07 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.22■□□□□ 0.19
PADI4Q9UM07 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.22■□□□□ 0.19
PADI4Q9UM07 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.22■□□□□ 0.19
PADI4Q9UM07 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.22■□□□□ 0.19
PADI4Q9UM07 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PADI4Q9UM07 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.22■□□□□ 0.19
PADI4Q9UM07 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PADI4Q9UM07 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PADI4Q9UM07 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PADI4Q9UM07 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PADI4Q9UM07 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
PADI4Q9UM07 PAUPAR-201ENST00000630360 2965 ntBASIC16.22■□□□□ 0.19
PADI4Q9UM07 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PADI4Q9UM07 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PADI4Q9UM07 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.22■□□□□ 0.19
PADI4Q9UM07 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PADI4Q9UM07 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PADI4Q9UM07 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PADI4Q9UM07 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PADI4Q9UM07 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.21■□□□□ 0.19
PADI4Q9UM07 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
PADI4Q9UM07 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PADI4Q9UM07 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PADI4Q9UM07 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.21■□□□□ 0.19
PADI4Q9UM07 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PADI4Q9UM07 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.21■□□□□ 0.19
PADI4Q9UM07 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
PADI4Q9UM07 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.21■□□□□ 0.19
PADI4Q9UM07 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PADI4Q9UM07 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PADI4Q9UM07 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
PADI4Q9UM07 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.21■□□□□ 0.19
PADI4Q9UM07 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PADI4Q9UM07 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.21■□□□□ 0.19
PADI4Q9UM07 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PADI4Q9UM07 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.21■□□□□ 0.19
PADI4Q9UM07 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.21■□□□□ 0.19
PADI4Q9UM07 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
PADI4Q9UM07 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.21■□□□□ 0.19
PADI4Q9UM07 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.21■□□□□ 0.19
PADI4Q9UM07 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
PADI4Q9UM07 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.21■□□□□ 0.19
PADI4Q9UM07 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PADI4Q9UM07 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.21■□□□□ 0.19
PADI4Q9UM07 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.21■□□□□ 0.19
PADI4Q9UM07 MIR4492-201ENST00000581627 80 ntBASIC16.21■□□□□ 0.19
PADI4Q9UM07 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PADI4Q9UM07 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PADI4Q9UM07 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PADI4Q9UM07 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PADI4Q9UM07 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PADI4Q9UM07 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PADI4Q9UM07 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PADI4Q9UM07 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
PADI4Q9UM07 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
PADI4Q9UM07 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.2■□□□□ 0.18
PADI4Q9UM07 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PADI4Q9UM07 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PADI4Q9UM07 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PADI4Q9UM07 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.2■□□□□ 0.18
PADI4Q9UM07 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.2■□□□□ 0.18
PADI4Q9UM07 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PADI4Q9UM07 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PADI4Q9UM07 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PADI4Q9UM07 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PADI4Q9UM07 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PADI4Q9UM07 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.2■□□□□ 0.18
PADI4Q9UM07 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PADI4Q9UM07 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
PADI4Q9UM07 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PADI4Q9UM07 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
PADI4Q9UM07 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
PADI4Q9UM07 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PADI4Q9UM07 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.2■□□□□ 0.18
PADI4Q9UM07 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PADI4Q9UM07 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
PADI4Q9UM07 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PADI4Q9UM07 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
PADI4Q9UM07 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
PADI4Q9UM07 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PADI4Q9UM07 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PADI4Q9UM07 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
PADI4Q9UM07 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PADI4Q9UM07 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
PADI4Q9UM07 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.2■□□□□ 0.18
PADI4Q9UM07 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.2■□□□□ 0.18
PADI4Q9UM07 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PADI4Q9UM07 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.2■□□□□ 0.18
PADI4Q9UM07 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.2■□□□□ 0.18
PADI4Q9UM07 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PADI4Q9UM07 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms