Protein–RNA interactions for Protein: Q8NDX2

SLC17A8, Vesicular glutamate transporter 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC17A8Q8NDX2 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC17A8Q8NDX2 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SLC17A8Q8NDX2 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC17A8Q8NDX2 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
SLC17A8Q8NDX2 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC17A8Q8NDX2 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC17A8Q8NDX2 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SLC17A8Q8NDX2 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC17A8Q8NDX2 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC17A8Q8NDX2 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SLC17A8Q8NDX2 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.16■□□□□ 0.5
SLC17A8Q8NDX2 U82695.1-201ENST00000635752 1889 ntBASIC18.16■□□□□ 0.5
SLC17A8Q8NDX2 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SLC17A8Q8NDX2 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SLC17A8Q8NDX2 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SLC17A8Q8NDX2 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SLC17A8Q8NDX2 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC18.15■□□□□ 0.5
SLC17A8Q8NDX2 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SLC17A8Q8NDX2 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC17A8Q8NDX2 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC17A8Q8NDX2 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC17A8Q8NDX2 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
SLC17A8Q8NDX2 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SLC17A8Q8NDX2 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.15■□□□□ 0.5
SLC17A8Q8NDX2 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
SLC17A8Q8NDX2 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
SLC17A8Q8NDX2 NSL1-201ENST00000366976 722 ntTSL 2 BASIC18.15■□□□□ 0.5
SLC17A8Q8NDX2 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC17A8Q8NDX2 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC18.15■□□□□ 0.5
SLC17A8Q8NDX2 AC093724.1-201ENST00000448659 1027 ntBASIC18.15■□□□□ 0.5
SLC17A8Q8NDX2 AC105233.2-201ENST00000523697 349 ntBASIC18.15■□□□□ 0.5
SLC17A8Q8NDX2 AF228730.5-201ENST00000530288 346 ntBASIC18.15■□□□□ 0.5
SLC17A8Q8NDX2 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC18.15■□□□□ 0.5
SLC17A8Q8NDX2 SNX29P1-201ENST00000548357 1007 ntBASIC18.15■□□□□ 0.5
SLC17A8Q8NDX2 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC18.15■□□□□ 0.5
SLC17A8Q8NDX2 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC18.15■□□□□ 0.5
SLC17A8Q8NDX2 AC073389.1-201ENST00000595595 795 ntBASIC18.15■□□□□ 0.5
SLC17A8Q8NDX2 COQ4-205ENST00000609948 956 ntTSL 2 BASIC18.15■□□□□ 0.5
SLC17A8Q8NDX2 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC18.15■□□□□ 0.5
SLC17A8Q8NDX2 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC17A8Q8NDX2 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC17A8Q8NDX2 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC17A8Q8NDX2 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC17A8Q8NDX2 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SLC17A8Q8NDX2 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC18.15■□□□□ 0.5
SLC17A8Q8NDX2 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC17A8Q8NDX2 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SLC17A8Q8NDX2 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC17A8Q8NDX2 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC17A8Q8NDX2 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC17A8Q8NDX2 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SLC17A8Q8NDX2 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SLC17A8Q8NDX2 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC17A8Q8NDX2 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC18.15■□□□□ 0.5
SLC17A8Q8NDX2 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC18.15■□□□□ 0.5
SLC17A8Q8NDX2 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
SLC17A8Q8NDX2 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
SLC17A8Q8NDX2 AC073439.1-201ENST00000624121 1774 ntBASIC18.14■□□□□ 0.5
SLC17A8Q8NDX2 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
SLC17A8Q8NDX2 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
SLC17A8Q8NDX2 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC18.14■□□□□ 0.5
SLC17A8Q8NDX2 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC18.14■□□□□ 0.49
SLC17A8Q8NDX2 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SLC17A8Q8NDX2 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC17A8Q8NDX2 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC17A8Q8NDX2 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
SLC17A8Q8NDX2 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SLC17A8Q8NDX2 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC18.14■□□□□ 0.49
SLC17A8Q8NDX2 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC18.14■□□□□ 0.49
SLC17A8Q8NDX2 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC17A8Q8NDX2 AC092171.3-201ENST00000610122 2651 ntBASIC18.14■□□□□ 0.49
SLC17A8Q8NDX2 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.49
SLC17A8Q8NDX2 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC17A8Q8NDX2 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SLC17A8Q8NDX2 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC18.14■□□□□ 0.49
SLC17A8Q8NDX2 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC18.14■□□□□ 0.49
SLC17A8Q8NDX2 AC087499.6-201ENST00000411576 835 ntBASIC18.14■□□□□ 0.49
SLC17A8Q8NDX2 HIST1H2BPS3-201ENST00000419683 341 ntBASIC18.14■□□□□ 0.49
SLC17A8Q8NDX2 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC17A8Q8NDX2 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC18.14■□□□□ 0.49
SLC17A8Q8NDX2 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC18.14■□□□□ 0.49
SLC17A8Q8NDX2 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC18.14■□□□□ 0.49
SLC17A8Q8NDX2 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC18.14■□□□□ 0.49
SLC17A8Q8NDX2 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SLC17A8Q8NDX2 AGER-214ENST00000538695 487 ntTSL 2 BASIC18.14■□□□□ 0.49
SLC17A8Q8NDX2 HNRNPUP1-201ENST00000554987 333 ntBASIC18.14■□□□□ 0.49
SLC17A8Q8NDX2 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC18.14■□□□□ 0.49
SLC17A8Q8NDX2 SSH2-211ENST00000590153 570 ntTSL 4 BASIC18.14■□□□□ 0.49
SLC17A8Q8NDX2 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SLC17A8Q8NDX2 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC18.14■□□□□ 0.49
SLC17A8Q8NDX2 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.14■□□□□ 0.49
SLC17A8Q8NDX2 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC18.14■□□□□ 0.49
SLC17A8Q8NDX2 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18.14■□□□□ 0.49
SLC17A8Q8NDX2 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC18.14■□□□□ 0.49
SLC17A8Q8NDX2 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
SLC17A8Q8NDX2 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
SLC17A8Q8NDX2 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SLC17A8Q8NDX2 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SLC17A8Q8NDX2 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC18.14■□□□□ 0.49
SLC17A8Q8NDX2 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms