Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.51■□□□□ 0.39
PDE6CP51160 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
PDE6CP51160 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.51■□□□□ 0.39
PDE6CP51160 HYMAI-201ENST00000635591 3347 ntBASIC17.51■□□□□ 0.39
PDE6CP51160 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDE6CP51160 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDE6CP51160 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PDE6CP51160 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PDE6CP51160 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDE6CP51160 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDE6CP51160 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PDE6CP51160 AC132872.4-202ENST00000622924 2756 ntBASIC17.51■□□□□ 0.39
PDE6CP51160 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDE6CP51160 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PDE6CP51160 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.5■□□□□ 0.39
PDE6CP51160 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
PDE6CP51160 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDE6CP51160 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.5■□□□□ 0.39
PDE6CP51160 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDE6CP51160 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PDE6CP51160 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.5■□□□□ 0.39
PDE6CP51160 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
PDE6CP51160 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.5■□□□□ 0.39
PDE6CP51160 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDE6CP51160 WASH6P-202ENST00000359512 1437 ntBASIC17.5■□□□□ 0.39
PDE6CP51160 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PDE6CP51160 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PDE6CP51160 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PDE6CP51160 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.5■□□□□ 0.39
PDE6CP51160 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.5■□□□□ 0.39
PDE6CP51160 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.5■□□□□ 0.39
PDE6CP51160 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
PDE6CP51160 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.5■□□□□ 0.39
PDE6CP51160 AC079140.1-201ENST00000508039 487 ntBASIC17.5■□□□□ 0.39
PDE6CP51160 KRT8P48-201ENST00000515599 1220 ntBASIC17.5■□□□□ 0.39
PDE6CP51160 IGHV3-62-201ENST00000520057 340 ntBASIC17.5■□□□□ 0.39
PDE6CP51160 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDE6CP51160 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDE6CP51160 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDE6CP51160 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
PDE6CP51160 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.5■□□□□ 0.39
PDE6CP51160 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PDE6CP51160 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.5■□□□□ 0.39
PDE6CP51160 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.5■□□□□ 0.39
PDE6CP51160 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PDE6CP51160 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.5■□□□□ 0.39
PDE6CP51160 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.5■□□□□ 0.39
PDE6CP51160 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.5■□□□□ 0.39
PDE6CP51160 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDE6CP51160 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDE6CP51160 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.49■□□□□ 0.39
PDE6CP51160 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PDE6CP51160 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDE6CP51160 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PDE6CP51160 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
PDE6CP51160 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.49■□□□□ 0.39
PDE6CP51160 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
PDE6CP51160 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDE6CP51160 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDE6CP51160 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.49■□□□□ 0.39
PDE6CP51160 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PDE6CP51160 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PDE6CP51160 MIR648-201ENST00000385046 94 ntBASIC17.49■□□□□ 0.39
PDE6CP51160 HMGN1P19-201ENST00000436976 333 ntBASIC17.49■□□□□ 0.39
PDE6CP51160 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.49■□□□□ 0.39
PDE6CP51160 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.49■□□□□ 0.39
PDE6CP51160 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.49■□□□□ 0.39
PDE6CP51160 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PDE6CP51160 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.49■□□□□ 0.39
PDE6CP51160 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.49■□□□□ 0.39
PDE6CP51160 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
PDE6CP51160 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
PDE6CP51160 LINC00628-201ENST00000628516 1289 ntBASIC17.49■□□□□ 0.39
PDE6CP51160 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PDE6CP51160 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.49■□□□□ 0.39
PDE6CP51160 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDE6CP51160 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDE6CP51160 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDE6CP51160 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PDE6CP51160 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.49■□□□□ 0.39
PDE6CP51160 AC105917.1-201ENST00000506637 2539 ntBASIC17.49■□□□□ 0.39
PDE6CP51160 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDE6CP51160 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PDE6CP51160 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PDE6CP51160 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.49■□□□□ 0.39
PDE6CP51160 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDE6CP51160 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDE6CP51160 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDE6CP51160 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.48■□□□□ 0.39
PDE6CP51160 AC073439.1-201ENST00000624121 1774 ntBASIC17.48■□□□□ 0.39
PDE6CP51160 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDE6CP51160 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.48■□□□□ 0.39
PDE6CP51160 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PDE6CP51160 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.48■□□□□ 0.39
PDE6CP51160 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDE6CP51160 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDE6CP51160 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDE6CP51160 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PDE6CP51160 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDE6CP51160 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms