Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
PCP4P48539 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
PCP4P48539 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
PCP4P48539 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
PCP4P48539 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC10.84□□□□□ -0.67
PCP4P48539 NAV1-203ENST00000367302 9685 ntTSL 5 BASIC10.84□□□□□ -0.67
PCP4P48539 ZNF341-201ENST00000342427 3661 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.67
PCP4P48539 LRSAM1-202ENST00000323301 3376 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.67
PCP4P48539 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
PCP4P48539 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
PCP4P48539 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
PCP4P48539 ATP2A1-201ENST00000357084 3532 ntTSL 2 BASIC10.83□□□□□ -0.68
PCP4P48539 NLRP2-206ENST00000427260 3411 ntTSL 2 BASIC10.83□□□□□ -0.68
PCP4P48539 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
PCP4P48539 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC10.83□□□□□ -0.68
PCP4P48539 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
PCP4P48539 ME2P1-201ENST00000426028 1970 ntBASIC10.83□□□□□ -0.68
PCP4P48539 COLQ-203ENST00000383788 3005 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
PCP4P48539 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
PCP4P48539 AP1B1-203ENST00000402502 2935 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
PCP4P48539 MYO9B-201ENST00000397274 7532 ntTSL 5 BASIC10.83□□□□□ -0.68
PCP4P48539 CAGE1-201ENST00000296742 2821 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
PCP4P48539 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
PCP4P48539 AL359258.2-201ENST00000564063 1566 ntBASIC10.83□□□□□ -0.68
PCP4P48539 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
PCP4P48539 SEC31A-202ENST00000311785 3909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
PCP4P48539 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC10.83□□□□□ -0.68
PCP4P48539 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC10.83□□□□□ -0.68
PCP4P48539 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC10.83□□□□□ -0.68
PCP4P48539 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
PCP4P48539 API5-202ENST00000420461 2009 ntTSL 2 BASIC10.83□□□□□ -0.68
PCP4P48539 HECTD4-202ENST00000377560 15759 ntAPPRIS P5 TSL 5 BASIC10.83□□□□□ -0.68
PCP4P48539 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
PCP4P48539 PHC2-203ENST00000373422 2799 ntTSL 2 BASIC10.83□□□□□ -0.68
PCP4P48539 ZNF549-201ENST00000240719 3969 ntAPPRIS P3 TSL 2 BASIC10.83□□□□□ -0.68
PCP4P48539 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
PCP4P48539 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
PCP4P48539 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC10.83□□□□□ -0.68
PCP4P48539 EPB42-202ENST00000441366 2374 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
PCP4P48539 PLEKHA6-202ENST00000414478 5091 ntTSL 5 BASIC10.83□□□□□ -0.68
PCP4P48539 NCDN-203ENST00000373253 3677 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
PCP4P48539 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
PCP4P48539 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
PCP4P48539 GRM7-201ENST00000357716 4127 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
PCP4P48539 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
PCP4P48539 ASB11-202ENST00000380470 2748 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
PCP4P48539 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC10.83□□□□□ -0.68
PCP4P48539 STK26-201ENST00000354719 3179 ntTSL 2 BASIC10.83□□□□□ -0.68
PCP4P48539 IL17REL-201ENST00000341280 3500 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
PCP4P48539 GATAD2A-201ENST00000358713 5510 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
PCP4P48539 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
PCP4P48539 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
PCP4P48539 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC10.82□□□□□ -0.68
PCP4P48539 ATG10-201ENST00000282185 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
PCP4P48539 DNAI2-202ENST00000446837 2474 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
PCP4P48539 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
PCP4P48539 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
PCP4P48539 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
PCP4P48539 ZNF827-201ENST00000379448 4197 ntAPPRIS P3 TSL 2 BASIC10.82□□□□□ -0.68
PCP4P48539 PCDHB6-201ENST00000231136 3266 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
PCP4P48539 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
PCP4P48539 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC10.82□□□□□ -0.68
PCP4P48539 CAMK2A-201ENST00000348628 5322 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
PCP4P48539 SPACA6P-AS-201ENST00000602324 3962 ntTSL 2 BASIC10.82□□□□□ -0.68
PCP4P48539 AC007614.5-201ENST00000623424 8892 ntBASIC10.82□□□□□ -0.68
PCP4P48539 RANGAP1-201ENST00000356244 3060 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
PCP4P48539 BTBD3-204ENST00000405977 5137 ntAPPRIS P4 TSL 5 BASIC10.82□□□□□ -0.68
PCP4P48539 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
PCP4P48539 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
PCP4P48539 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
PCP4P48539 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
PCP4P48539 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
PCP4P48539 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC10.82□□□□□ -0.68
PCP4P48539 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
PCP4P48539 AL391294.1-201ENST00000641352 4068 ntBASIC10.82□□□□□ -0.68
PCP4P48539 BCL2L1-203ENST00000376062 2578 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
PCP4P48539 PNPLA7-201ENST00000277531 4581 ntAPPRIS P3 TSL 2 BASIC10.82□□□□□ -0.68
PCP4P48539 MYADML-201ENST00000474610 2147 ntBASIC10.82□□□□□ -0.68
PCP4P48539 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
PCP4P48539 ZSCAN20-202ENST00000373413 2367 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
PCP4P48539 MDH2-204ENST00000443006 2020 ntTSL 2 BASIC10.82□□□□□ -0.68
PCP4P48539 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
PCP4P48539 PDE6B-212ENST00000496514 3232 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
PCP4P48539 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
PCP4P48539 PLEKHM1-201ENST00000430334 5263 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
PCP4P48539 TWNK-201ENST00000311916 3131 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
PCP4P48539 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
PCP4P48539 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC10.82□□□□□ -0.68
PCP4P48539 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
PCP4P48539 PRKCQ-201ENST00000263125 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
PCP4P48539 TRIM25-202ENST00000537230 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
PCP4P48539 TRPV1-201ENST00000310522 2340 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
PCP4P48539 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
PCP4P48539 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
PCP4P48539 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC10.81□□□□□ -0.68
PCP4P48539 TLR12P-201ENST00000413515 2706 ntBASIC10.81□□□□□ -0.68
PCP4P48539 TP53-222ENST00000617185 2724 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
PCP4P48539 USP20-201ENST00000315480 4458 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
PCP4P48539 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
PCP4P48539 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 187.9 ms