RNA–Protein interactions for RNA: ENST00000617185.4

TP53-222, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-222ENST00000617185 NISCHQ9Y2I1 1504 aa23.03■■□□□ 1.28
TP53-222ENST00000617185 PELP1Q8IZL8 1130 aaKnown RBP19.93■□□□□ 0.78
TP53-222ENST00000617185 SHROOM4Q9ULL8 1493 aa19.81■□□□□ 0.76
TP53-222ENST00000617185 DCAF8L2P0C7V8 631 aa19.63■□□□□ 0.73
TP53-222ENST00000617185 HRCP23327 699 aa19.59■□□□□ 0.73
TP53-222ENST00000617185 CCDC180Q9P1Z9 1646 aa19.57■□□□□ 0.72
TP53-222ENST00000617185 MYT1Q01538 1121 aa19.39■□□□□ 0.7
TP53-222ENST00000617185 ZCCHC6Q5VYS8 1495 aaKnown RBP19.39■□□□□ 0.69
TP53-222ENST00000617185 SUPT5HO00267 1087 aaKnown RBP19.26■□□□□ 0.67
TP53-222ENST00000617185 PPARGC1BQ86YN6 1023 aaKnown RBP19■□□□□ 0.63
TP53-222ENST00000617185 PCGF6Q9BYE7 350 aa18.81■□□□□ 0.6
TP53-222ENST00000617185 SCAF1Q9H7N4 1312 aaKnown RBP18.79■□□□□ 0.6
TP53-222ENST00000617185 DCAF1Q9Y4B6 1507 aa18.76■□□□□ 0.59
TP53-222ENST00000617185 ABCC9O60706 1549 aa18.75■□□□□ 0.59
TP53-222ENST00000617185 SCRIBQ14160 1630 aa18.58■□□□□ 0.56
TP53-222ENST00000617185 MYO15BQ96JP2 1530 aa18.43■□□□□ 0.54
TP53-222ENST00000617185 CHIC1Q5VXU3 224 aa18.4■□□□□ 0.54
TP53-222ENST00000617185 TTBK1Q5TCY1 1321 aaPredicted RBP18.4■□□□□ 0.54
TP53-222ENST00000617185 ZEB1P37275 1124 aaPredicted RBP18.29■□□□□ 0.52
TP53-222ENST00000617185 ACIN1Q9UKV3 1341 aaKnown RBP18.21■□□□□ 0.51
TP53-222ENST00000617185 NACADO15069 1562 aa18.21■□□□□ 0.51
TP53-222ENST00000617185 RSF1Q96T23 1441 aaPredicted RBP18.17■□□□□ 0.5
TP53-222ENST00000617185 TRIM26Q12899 539 aaPredicted RBP18.16■□□□□ 0.5
TP53-222ENST00000617185 CECR2Q9BXF3 1484 aa18.14■□□□□ 0.49
TP53-222ENST00000617185 NEUROD1Q13562 356 aa18.07■□□□□ 0.48
TP53-222ENST00000617185 GTF3C3Q9Y5Q9 886 aa18.05■□□□□ 0.48
TP53-222ENST00000617185 RB1CC1Q8TDY2 1594 aa18.03■□□□□ 0.48
TP53-222ENST00000617185 LOC105371045A0A1W2PR82 267 aa18.01■□□□□ 0.47
TP53-222ENST00000617185 PABPN1Q86U42 306 aaKnown RBP eCLIP17.99■□□□□ 0.47
TP53-222ENST00000617185 MROH2BQ7Z745 1585 aa17.98■□□□□ 0.47
TP53-222ENST00000617185 CENPBP07199 599 aaPredicted RBP17.96■□□□□ 0.47
TP53-222ENST00000617185 EHMT2Q96KQ7 1210 aa17.91■□□□□ 0.46
TP53-222ENST00000617185 WIZO95785 1651 aa17.88■□□□□ 0.45
TP53-222ENST00000617185 FAM9AQ8IZU1 332 aaPredicted RBP17.88■□□□□ 0.45
TP53-222ENST00000617185 BCL11AQ9H165 835 aa17.85■□□□□ 0.45
TP53-222ENST00000617185 TRIM41Q8WV44 630 aa17.83■□□□□ 0.45
TP53-222ENST00000617185 UNC13AQ9UPW8 1703 aa17.8■□□□□ 0.44
TP53-222ENST00000617185 BAZ1AQ9NRL2 1556 aaPredicted RBP17.68■□□□□ 0.42
TP53-222ENST00000617185 BICRAQ9NZM4 1560 aa17.6■□□□□ 0.41
TP53-222ENST00000617185 SMARCA4P51532 1647 aa17.6■□□□□ 0.41
TP53-222ENST00000617185 PRKCSHP14314 528 aaPredicted RBP17.57■□□□□ 0.4
TP53-222ENST00000617185 DIEXFQ68CQ4 756 aaKnown RBP17.57■□□□□ 0.4
TP53-222ENST00000617185 ANP32EQ9BTT0 268 aa17.52■□□□□ 0.4
TP53-222ENST00000617185 CCDC88BA6NC98 1476 aa17.49■□□□□ 0.39
TP53-222ENST00000617185 TOP2AP11388 1531 aaKnown RBP17.46■□□□□ 0.39
TP53-222ENST00000617185 ABCC8Q09428 1581 aa17.45■□□□□ 0.38
TP53-222ENST00000617185 SMARCA2P51531 1590 aa17.4■□□□□ 0.38
TP53-222ENST00000617185 ERICH6Q7L0X2 663 aa17.34■□□□□ 0.37
TP53-222ENST00000617185 EIF4G1Q04637 1599 aaKnown RBP17.34■□□□□ 0.37
TP53-222ENST00000617185 CSRNP3Q8WYN3 585 aa17.27■□□□□ 0.36
TP53-222ENST00000617185 CCER1Q8TC90 406 aaPredicted RBP17.26■□□□□ 0.35
TP53-222ENST00000617185 ATAD2BQ9ULI0 1458 aa17.26■□□□□ 0.35
TP53-222ENST00000617185 YTHDC1Q96MU7 727 aaKnown RBP17.25■□□□□ 0.35
TP53-222ENST00000617185 SOGA1O94964 1423 aa17.22■□□□□ 0.35
TP53-222ENST00000617185 BAZ1BQ9UIG0 1483 aaKnown RBP17.22■□□□□ 0.35
TP53-222ENST00000617185 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.21■□□□□ 0.35
TP53-222ENST00000617185 CLSPNQ9HAW4 1339 aa17.19■□□□□ 0.34
TP53-222ENST00000617185 RUSC2Q8N2Y8 1516 aa17.18■□□□□ 0.34
TP53-222ENST00000617185 PEG3Q9GZU2 1588 aa17.15■□□□□ 0.34
TP53-222ENST00000617185 TSHZ2Q9NRE2 1034 aa17.14■□□□□ 0.33
TP53-222ENST00000617185 ZNF316A6NFI3 1004 aaPredicted RBP17.12■□□□□ 0.33
TP53-222ENST00000617185 APLP2Q06481 763 aa17.11■□□□□ 0.33
TP53-222ENST00000617185 WRNQ14191 1432 aaPredicted RBP eCLIP17.09■□□□□ 0.33
TP53-222ENST00000617185 UBTFP17480 764 aaKnown RBP17.09■□□□□ 0.33
TP53-222ENST00000617185 RANGAP1P46060 587 aaPredicted RBP17.06■□□□□ 0.32
TP53-222ENST00000617185 SUPT16HQ9Y5B9 1047 aaKnown RBP17.06■□□□□ 0.32
TP53-222ENST00000617185 SYNJ1O43426 1573 aa17.02■□□□□ 0.32
TP53-222ENST00000617185 MIER1Q8N108 512 aa17.02■□□□□ 0.31
TP53-222ENST00000617185 CEP162Q5TB80 1403 aa16.93■□□□□ 0.3
TP53-222ENST00000617185 NCAPD3P42695 1498 aa16.9■□□□□ 0.3
TP53-222ENST00000617185 TNIKQ9UKE5 1360 aa16.83■□□□□ 0.29
TP53-222ENST00000617185 HMGXB3Q12766 1538 aa16.82■□□□□ 0.28
TP53-222ENST00000617185 EEA1Q15075 1411 aa16.81■□□□□ 0.28
TP53-222ENST00000617185 GOLGA3Q08378 1498 aa16.81■□□□□ 0.28
TP53-222ENST00000617185 RAPGEF2Q9Y4G8 1499 aa16.78■□□□□ 0.28
TP53-222ENST00000617185 CC2D2AQ9P2K1 1620 aa16.75■□□□□ 0.27
TP53-222ENST00000617185 TOP2BQ02880 1626 aa16.74■□□□□ 0.27
TP53-222ENST00000617185 CUX1P39880 1505 aa16.74■□□□□ 0.27
TP53-222ENST00000617185 CEP164Q9UPV0 1460 aa16.73■□□□□ 0.27
TP53-222ENST00000617185 CFTRP13569 1480 aa16.72■□□□□ 0.27
TP53-222ENST00000617185 DNAJC5BQ9UF47 199 aa16.71■□□□□ 0.27
TP53-222ENST00000617185 RBM19Q9Y4C8 960 aaKnown RBP16.69■□□□□ 0.26
TP53-222ENST00000617185 CLIP1P30622 1438 aa16.68■□□□□ 0.26
TP53-222ENST00000617185 MYT1LQ9UL68 1186 aa16.67■□□□□ 0.26
TP53-222ENST00000617185 CADPSQ9ULU8 1353 aa16.64■□□□□ 0.25
TP53-222ENST00000617185 BIVM-ERCC5R4GMW8 1640 aa16.64■□□□□ 0.25
TP53-222ENST00000617185 ANO8Q9HCE9 1232 aaPredicted RBP16.63■□□□□ 0.25
TP53-222ENST00000617185 KIF21BO75037 1637 aa16.63■□□□□ 0.25
TP53-222ENST00000617185 NESP48681 1621 aa16.62■□□□□ 0.25
TP53-222ENST00000617185 HNRNPUL2Q1KMD3 747 aaKnown RBP16.59■□□□□ 0.25
TP53-222ENST00000617185 MSH5O43196 834 aa16.56■□□□□ 0.24
TP53-222ENST00000617185 KIF27Q86VH2 1401 aa16.56■□□□□ 0.24
TP53-222ENST00000617185 CUX2O14529 1486 aa16.55■□□□□ 0.24
TP53-222ENST00000617185 PRXQ9BXM0 1461 aa16.52■□□□□ 0.23
TP53-222ENST00000617185 BCANQ96GW7 911 aa16.52■□□□□ 0.23
TP53-222ENST00000617185 FGD5Q6ZNL6 1462 aa16.51■□□□□ 0.23
TP53-222ENST00000617185 FANCD2Q9BXW9 1451 aa16.51■□□□□ 0.23
TP53-222ENST00000617185 VPS8Q8N3P4 1428 aa16.5■□□□□ 0.23
TP53-222ENST00000617185 DEKP35659 375 aaKnown RBP16.49■□□□□ 0.23
TP53-222ENST00000617185 ERICH6BQ5W0A0 696 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms