RNA–Protein interactions for RNA: ENST00000240719.7

ZNF549-201, Transcript of zinc finger protein 549, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF549, Length 3,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549-201ENST00000240719 NISCHQ9Y2I1 1504 aa21.68■■□□□ 1.06
ZNF549-201ENST00000240719 DCAF8L2P0C7V8 631 aa20.5■□□□□ 0.87
ZNF549-201ENST00000240719 SHROOM4Q9ULL8 1493 aa20.48■□□□□ 0.87
ZNF549-201ENST00000240719 SUPT5HO00267 1087 aaKnown RBP20.47■□□□□ 0.87
ZNF549-201ENST00000240719 EHMT2Q96KQ7 1210 aa19.58■□□□□ 0.73
ZNF549-201ENST00000240719 PCGF6Q9BYE7 350 aa19.57■□□□□ 0.72
ZNF549-201ENST00000240719 FAM9AQ8IZU1 332 aaPredicted RBP19.19■□□□□ 0.66
ZNF549-201ENST00000240719 PPARGC1BQ86YN6 1023 aaKnown RBP19.15■□□□□ 0.66
ZNF549-201ENST00000240719 LOC105371045A0A1W2PR82 267 aa19.08■□□□□ 0.65
ZNF549-201ENST00000240719 PELP1Q8IZL8 1130 aaKnown RBP19.08■□□□□ 0.65
ZNF549-201ENST00000240719 CHIC1Q5VXU3 224 aa19.08■□□□□ 0.64
ZNF549-201ENST00000240719 HRCP23327 699 aa19.03■□□□□ 0.64
ZNF549-201ENST00000240719 TTBK1Q5TCY1 1321 aaPredicted RBP18.91■□□□□ 0.62
ZNF549-201ENST00000240719 TRIM41Q8WV44 630 aa18.69■□□□□ 0.58
ZNF549-201ENST00000240719 MYT1Q01538 1121 aa18.64■□□□□ 0.57
ZNF549-201ENST00000240719 TRIM26Q12899 539 aaPredicted RBP18.55■□□□□ 0.56
ZNF549-201ENST00000240719 MYO15BQ96JP2 1530 aa18.54■□□□□ 0.56
ZNF549-201ENST00000240719 CCER1Q8TC90 406 aaPredicted RBP18.41■□□□□ 0.54
ZNF549-201ENST00000240719 RANGAP1P46060 587 aaPredicted RBP18.36■□□□□ 0.53
ZNF549-201ENST00000240719 ZEB1P37275 1124 aaPredicted RBP18.27■□□□□ 0.52
ZNF549-201ENST00000240719 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.27■□□□□ 0.51
ZNF549-201ENST00000240719 YTHDC1Q96MU7 727 aaKnown RBP18.22■□□□□ 0.51
ZNF549-201ENST00000240719 ZCCHC6Q5VYS8 1495 aaKnown RBP18.17■□□□□ 0.5
ZNF549-201ENST00000240719 UBTFP17480 764 aaKnown RBP18.11■□□□□ 0.49
ZNF549-201ENST00000240719 CENPBP07199 599 aaPredicted RBP17.97■□□□□ 0.47
ZNF549-201ENST00000240719 APLP2Q06481 763 aa17.95■□□□□ 0.46
ZNF549-201ENST00000240719 HNRNPUL2Q1KMD3 747 aaKnown RBP17.92■□□□□ 0.46
ZNF549-201ENST00000240719 DCAF1Q9Y4B6 1507 aa17.87■□□□□ 0.45
ZNF549-201ENST00000240719 DIEXFQ68CQ4 756 aaKnown RBP17.86■□□□□ 0.45
ZNF549-201ENST00000240719 SCAF1Q9H7N4 1312 aaKnown RBP17.83■□□□□ 0.44
ZNF549-201ENST00000240719 GTF3C3Q9Y5Q9 886 aa17.8■□□□□ 0.44
ZNF549-201ENST00000240719 ABCC9O60706 1549 aa17.76■□□□□ 0.43
ZNF549-201ENST00000240719 ITGAEP38570 1179 aa17.68■□□□□ 0.42
ZNF549-201ENST00000240719 NEUROD1Q13562 356 aa17.68■□□□□ 0.42
ZNF549-201ENST00000240719 SCRIBQ14160 1630 aa17.67■□□□□ 0.42
ZNF549-201ENST00000240719 ACIN1Q9UKV3 1341 aaKnown RBP17.63■□□□□ 0.41
ZNF549-201ENST00000240719 PABPN1Q86U42 306 aaKnown RBP eCLIP17.62■□□□□ 0.41
ZNF549-201ENST00000240719 ATP1B4Q9UN42 357 aaPredicted RBP17.61■□□□□ 0.41
ZNF549-201ENST00000240719 RSF1Q96T23 1441 aaPredicted RBP17.57■□□□□ 0.4
ZNF549-201ENST00000240719 CCDC180Q9P1Z9 1646 aa17.52■□□□□ 0.4
ZNF549-201ENST00000240719 ZNF316A6NFI3 1004 aaPredicted RBP17.44■□□□□ 0.38
ZNF549-201ENST00000240719 CSRNP3Q8WYN3 585 aa17.4■□□□□ 0.38
ZNF549-201ENST00000240719 CECR2Q9BXF3 1484 aa17.34■□□□□ 0.37
ZNF549-201ENST00000240719 MIER1Q8N108 512 aa17.32■□□□□ 0.36
ZNF549-201ENST00000240719 BCANQ96GW7 911 aa17.31■□□□□ 0.36
ZNF549-201ENST00000240719 RB1CC1Q8TDY2 1594 aa17.3■□□□□ 0.36
ZNF549-201ENST00000240719 CNGB1Q14028 1251 aaPredicted RBP17.2■□□□□ 0.34
ZNF549-201ENST00000240719 BCL11AQ9H165 835 aa17.18■□□□□ 0.34
ZNF549-201ENST00000240719 ERICH6Q7L0X2 663 aa17.15■□□□□ 0.34
ZNF549-201ENST00000240719 CEP162Q5TB80 1403 aa17.14■□□□□ 0.33
ZNF549-201ENST00000240719 FAM50AQ14320 339 aaKnown RBP17.11■□□□□ 0.33
ZNF549-201ENST00000240719 SOGA1O94964 1423 aa17.1■□□□□ 0.33
ZNF549-201ENST00000240719 NEFLP07196 543 aa17.09■□□□□ 0.33
ZNF549-201ENST00000240719 P3H3Q8IVL6 736 aa17.09■□□□□ 0.33
ZNF549-201ENST00000240719 MROH2BQ7Z745 1585 aa17.08■□□□□ 0.33
ZNF549-201ENST00000240719 HIRIP3Q9BW71 556 aaPredicted RBP17.04■□□□□ 0.32
ZNF549-201ENST00000240719 ABCC8Q09428 1581 aa17.02■□□□□ 0.32
ZNF549-201ENST00000240719 CCDC88BA6NC98 1476 aa17■□□□□ 0.31
ZNF549-201ENST00000240719 POLR3GLQ9BT43 218 aa16.95■□□□□ 0.3
ZNF549-201ENST00000240719 DDX10Q13206 875 aaKnown RBP16.94■□□□□ 0.3
ZNF549-201ENST00000240719 CLIP1P30622 1438 aa16.92■□□□□ 0.3
ZNF549-201ENST00000240719 WIZO95785 1651 aa16.91■□□□□ 0.3
ZNF549-201ENST00000240719 TNIKQ9UKE5 1360 aa16.88■□□□□ 0.29
ZNF549-201ENST00000240719 RUSC2Q8N2Y8 1516 aa16.88■□□□□ 0.29
ZNF549-201ENST00000240719 TRIM52Q96A61 297 aa16.88■□□□□ 0.29
ZNF549-201ENST00000240719 FKBP8Q14318 412 aa16.87■□□□□ 0.29
ZNF549-201ENST00000240719 ARID3CA6NKF2 412 aa16.85■□□□□ 0.29
ZNF549-201ENST00000240719 WRNQ14191 1432 aaPredicted RBP eCLIP16.8■□□□□ 0.28
ZNF549-201ENST00000240719 GOLGA3Q08378 1498 aa16.79■□□□□ 0.28
ZNF549-201ENST00000240719 KANK4Q5T7N3 995 aaPredicted RBP16.77■□□□□ 0.28
ZNF549-201ENST00000240719 IRX6P78412 446 aaPredicted RBP16.75■□□□□ 0.27
ZNF549-201ENST00000240719 ANP32EQ9BTT0 268 aa16.75■□□□□ 0.27
ZNF549-201ENST00000240719 ANP32CO43423 234 aa16.74■□□□□ 0.27
ZNF549-201ENST00000240719 SIN3AQ96ST3 1273 aa16.74■□□□□ 0.27
ZNF549-201ENST00000240719 PRKCSHP14314 528 aaPredicted RBP16.73■□□□□ 0.27
ZNF549-201ENST00000240719 KCNH8Q96L42 1107 aa16.73■□□□□ 0.27
ZNF549-201ENST00000240719 SUPT16HQ9Y5B9 1047 aaKnown RBP16.71■□□□□ 0.27
ZNF549-201ENST00000240719 SENP3-EIF4A1A0A087X0R7 540 aa16.7■□□□□ 0.26
ZNF549-201ENST00000240719 BAZ1AQ9NRL2 1556 aaPredicted RBP16.68■□□□□ 0.26
ZNF549-201ENST00000240719 NACADO15069 1562 aa16.67■□□□□ 0.26
ZNF549-201ENST00000240719 ZNF326Q5BKZ1 582 aaKnown RBP16.64■□□□□ 0.25
ZNF549-201ENST00000240719 EEA1Q15075 1411 aa16.62■□□□□ 0.25
ZNF549-201ENST00000240719 CHIC2Q9UKJ5 165 aa16.62■□□□□ 0.25
ZNF549-201ENST00000240719 HNRNPUQ00839 825 aaKnown RBP eCLIP16.61■□□□□ 0.25
ZNF549-201ENST00000240719 CEP164Q9UPV0 1460 aa16.61■□□□□ 0.25
ZNF549-201ENST00000240719 VPS8Q8N3P4 1428 aa16.55■□□□□ 0.24
ZNF549-201ENST00000240719 FAM9BQ8IZU0 186 aa16.54■□□□□ 0.24
ZNF549-201ENST00000240719 RAPGEF2Q9Y4G8 1499 aa16.53■□□□□ 0.24
ZNF549-201ENST00000240719 TONSLQ96HA7 1378 aa16.5■□□□□ 0.23
ZNF549-201ENST00000240719 CDK11AQ9UQ88 783 aaPredicted RBP16.48■□□□□ 0.23
ZNF549-201ENST00000240719 TSHZ2Q9NRE2 1034 aa16.46■□□□□ 0.23
ZNF549-201ENST00000240719 RRP7BPQ9NSQ0 103 aa16.46■□□□□ 0.23
ZNF549-201ENST00000240719 BAZ1BQ9UIG0 1483 aaKnown RBP16.46■□□□□ 0.23
ZNF549-201ENST00000240719 TOP2AP11388 1531 aaKnown RBP16.44■□□□□ 0.22
ZNF549-201ENST00000240719 CCNB3Q8WWL7 1395 aa16.44■□□□□ 0.22
ZNF549-201ENST00000240719 DHX57Q6P158 1386 aaKnown RBP16.43■□□□□ 0.22
ZNF549-201ENST00000240719 EIF5BO60841 1220 aaKnown RBP16.43■□□□□ 0.22
ZNF549-201ENST00000240719 SALL2Q9Y467 1007 aaPredicted RBP16.42■□□□□ 0.22
ZNF549-201ENST00000240719 RAB3GAP2Q9H2M9 1393 aa16.38■□□□□ 0.21
ZNF549-201ENST00000240719 CLSPNQ9HAW4 1339 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms