RNA–Protein interactions for RNA: ENST00000231136.3

PCDHB6-201, Transcript of protocadherin beta 6, humanhuman

APPRIS P1 BASIC

Gene PCDHB6, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB6-201ENST00000231136 NISCHQ9Y2I1 1504 aa28.61■■■□□ 2.17
PCDHB6-201ENST00000231136 DCAF8L2P0C7V8 631 aa24.51■■□□□ 1.51
PCDHB6-201ENST00000231136 CCDC180Q9P1Z9 1646 aa24.47■■□□□ 1.51
PCDHB6-201ENST00000231136 SHROOM4Q9ULL8 1493 aa24.24■■□□□ 1.47
PCDHB6-201ENST00000231136 ZCCHC6Q5VYS8 1495 aaKnown RBP23.98■■□□□ 1.43
PCDHB6-201ENST00000231136 ABCC9O60706 1549 aa23.88■■□□□ 1.41
PCDHB6-201ENST00000231136 SUPT5HO00267 1087 aaKnown RBP23.36■■□□□ 1.33
PCDHB6-201ENST00000231136 DCAF1Q9Y4B6 1507 aa23.25■■□□□ 1.31
PCDHB6-201ENST00000231136 SCRIBQ14160 1630 aa23.16■■□□□ 1.3
PCDHB6-201ENST00000231136 NACADO15069 1562 aa22.93■■□□□ 1.26
PCDHB6-201ENST00000231136 MYO15BQ96JP2 1530 aa22.84■■□□□ 1.25
PCDHB6-201ENST00000231136 PABPN1Q86U42 306 aaKnown RBP eCLIP22.83■■□□□ 1.24
PCDHB6-201ENST00000231136 RB1CC1Q8TDY2 1594 aa22.79■■□□□ 1.24
PCDHB6-201ENST00000231136 CECR2Q9BXF3 1484 aa22.57■■□□□ 1.2
PCDHB6-201ENST00000231136 UNC13AQ9UPW8 1703 aa22.42■■□□□ 1.18
PCDHB6-201ENST00000231136 RSF1Q96T23 1441 aaPredicted RBP22.42■■□□□ 1.18
PCDHB6-201ENST00000231136 MROH2BQ7Z745 1585 aa22.31■■□□□ 1.16
PCDHB6-201ENST00000231136 BICRAQ9NZM4 1560 aa22.27■■□□□ 1.16
PCDHB6-201ENST00000231136 WIZO95785 1651 aa22.13■■□□□ 1.13
PCDHB6-201ENST00000231136 CHIC1Q5VXU3 224 aa22.11■■□□□ 1.13
PCDHB6-201ENST00000231136 BAZ1AQ9NRL2 1556 aaPredicted RBP21.98■■□□□ 1.11
PCDHB6-201ENST00000231136 SMARCA4P51532 1647 aa21.93■■□□□ 1.1
PCDHB6-201ENST00000231136 EHMT2Q96KQ7 1210 aa21.73■■□□□ 1.07
PCDHB6-201ENST00000231136 FAM9AQ8IZU1 332 aaPredicted RBP21.7■■□□□ 1.07
PCDHB6-201ENST00000231136 CCDC88BA6NC98 1476 aa21.67■■□□□ 1.06
PCDHB6-201ENST00000231136 TRIM41Q8WV44 630 aa21.67■■□□□ 1.06
PCDHB6-201ENST00000231136 ATAD2BQ9ULI0 1458 aa21.66■■□□□ 1.06
PCDHB6-201ENST00000231136 LOC105371045A0A1W2PR82 267 aa21.63■■□□□ 1.05
PCDHB6-201ENST00000231136 TOP2AP11388 1531 aaKnown RBP21.63■■□□□ 1.05
PCDHB6-201ENST00000231136 EIF4G1Q04637 1599 aaKnown RBP21.6■■□□□ 1.05
PCDHB6-201ENST00000231136 BAZ1BQ9UIG0 1483 aaKnown RBP21.56■■□□□ 1.04
PCDHB6-201ENST00000231136 SMARCA2P51531 1590 aa21.54■■□□□ 1.04
PCDHB6-201ENST00000231136 DNAJC5BQ9UF47 199 aa21.47■■□□□ 1.03
PCDHB6-201ENST00000231136 ABCC8Q09428 1581 aa21.42■■□□□ 1.02
PCDHB6-201ENST00000231136 PEG3Q9GZU2 1588 aa21.41■■□□□ 1.02
PCDHB6-201ENST00000231136 CC2D2AQ9P2K1 1620 aa21.32■■□□□ 1
PCDHB6-201ENST00000231136 NCAPD3P42695 1498 aa21.31■■□□□ 1
PCDHB6-201ENST00000231136 HMGXB3Q12766 1538 aa21.13■□□□□ 0.97
PCDHB6-201ENST00000231136 SOGA1O94964 1423 aa21.09■□□□□ 0.97
PCDHB6-201ENST00000231136 WRNQ14191 1432 aaPredicted RBP eCLIP21.07■□□□□ 0.96
PCDHB6-201ENST00000231136 RUSC2Q8N2Y8 1516 aa21.07■□□□□ 0.96
PCDHB6-201ENST00000231136 PCGF6Q9BYE7 350 aa21.02■□□□□ 0.96
PCDHB6-201ENST00000231136 NESP48681 1621 aa21.01■□□□□ 0.95
PCDHB6-201ENST00000231136 SYNJ1O43426 1573 aa20.98■□□□□ 0.95
PCDHB6-201ENST00000231136 CADPSQ9ULU8 1353 aa20.94■□□□□ 0.94
PCDHB6-201ENST00000231136 CFTRP13569 1480 aa20.93■□□□□ 0.94
PCDHB6-201ENST00000231136 RANGAP1P46060 587 aaPredicted RBP20.91■□□□□ 0.94
PCDHB6-201ENST00000231136 PPARGC1BQ86YN6 1023 aaKnown RBP20.88■□□□□ 0.93
PCDHB6-201ENST00000231136 CSRNP3Q8WYN3 585 aa20.85■□□□□ 0.93
PCDHB6-201ENST00000231136 UBTFP17480 764 aaKnown RBP20.83■□□□□ 0.92
PCDHB6-201ENST00000231136 CUX1P39880 1505 aa20.79■□□□□ 0.92
PCDHB6-201ENST00000231136 FANCD2Q9BXW9 1451 aa20.74■□□□□ 0.91
PCDHB6-201ENST00000231136 TTBK1Q5TCY1 1321 aaPredicted RBP20.74■□□□□ 0.91
PCDHB6-201ENST00000231136 TOP2BQ02880 1626 aa20.67■□□□□ 0.9
PCDHB6-201ENST00000231136 RAD54L2Q9Y4B4 1467 aa20.6■□□□□ 0.89
PCDHB6-201ENST00000231136 FGD5Q6ZNL6 1462 aa20.58■□□□□ 0.88
PCDHB6-201ENST00000231136 RAPGEF2Q9Y4G8 1499 aa20.55■□□□□ 0.88
PCDHB6-201ENST00000231136 BIVM-ERCC5R4GMW8 1640 aa20.54■□□□□ 0.88
PCDHB6-201ENST00000231136 CUX2O14529 1486 aa20.54■□□□□ 0.88
PCDHB6-201ENST00000231136 CEP164Q9UPV0 1460 aa20.52■□□□□ 0.88
PCDHB6-201ENST00000231136 URB2Q14146 1524 aaKnown RBP20.49■□□□□ 0.87
PCDHB6-201ENST00000231136 EEA1Q15075 1411 aa20.49■□□□□ 0.87
PCDHB6-201ENST00000231136 CEP162Q5TB80 1403 aa20.48■□□□□ 0.87
PCDHB6-201ENST00000231136 PDS5BQ9NTI5 1447 aa20.48■□□□□ 0.87
PCDHB6-201ENST00000231136 TOPBP1Q92547 1522 aa20.48■□□□□ 0.87
PCDHB6-201ENST00000231136 TDRD9Q8NDG6 1382 aaKnown RBP20.47■□□□□ 0.87
PCDHB6-201ENST00000231136 LAMC3Q9Y6N6 1575 aa20.46■□□□□ 0.87
PCDHB6-201ENST00000231136 KIF27Q86VH2 1401 aa20.46■□□□□ 0.87
PCDHB6-201ENST00000231136 GOLGA3Q08378 1498 aa20.45■□□□□ 0.86
PCDHB6-201ENST00000231136 PRDM2Q13029 1718 aa20.45■□□□□ 0.86
PCDHB6-201ENST00000231136 HRCP23327 699 aa20.44■□□□□ 0.86
PCDHB6-201ENST00000231136 POLA1P09884 1462 aaPredicted RBP20.44■□□□□ 0.86
PCDHB6-201ENST00000231136 KIF21AQ7Z4S6 1674 aa20.44■□□□□ 0.86
PCDHB6-201ENST00000231136 TNIKQ9UKE5 1360 aa20.43■□□□□ 0.86
PCDHB6-201ENST00000231136 IGF1RP08069 1367 aa20.4■□□□□ 0.86
PCDHB6-201ENST00000231136 DNMBPQ6XZF7 1577 aa20.36■□□□□ 0.85
PCDHB6-201ENST00000231136 P3H3Q8IVL6 736 aa20.33■□□□□ 0.85
PCDHB6-201ENST00000231136 ERCC6Q03468 1493 aa20.33■□□□□ 0.84
PCDHB6-201ENST00000231136 PRXQ9BXM0 1461 aa20.31■□□□□ 0.84
PCDHB6-201ENST00000231136 CARMIL1Q5VZK9 1371 aa20.3■□□□□ 0.84
PCDHB6-201ENST00000231136 CLIP1P30622 1438 aa20.29■□□□□ 0.84
PCDHB6-201ENST00000231136 TRIM26Q12899 539 aaPredicted RBP20.27■□□□□ 0.84
PCDHB6-201ENST00000231136 KIF21BO75037 1637 aa20.26■□□□□ 0.83
PCDHB6-201ENST00000231136 AQRO60306 1485 aaKnown RBP eCLIP20.26■□□□□ 0.83
PCDHB6-201ENST00000231136 ABCA10Q8WWZ4 1543 aa20.2■□□□□ 0.82
PCDHB6-201ENST00000231136 MRC2Q9UBG0 1479 aa20.19■□□□□ 0.82
PCDHB6-201ENST00000231136 ZNF608Q9ULD9 1512 aaPredicted RBP20.18■□□□□ 0.82
PCDHB6-201ENST00000231136 ATP1B4Q9UN42 357 aaPredicted RBP20.16■□□□□ 0.82
PCDHB6-201ENST00000231136 GAPVD1Q14C86 1478 aa20.14■□□□□ 0.81
PCDHB6-201ENST00000231136 FBLN2P98095 1184 aa20.13■□□□□ 0.81
PCDHB6-201ENST00000231136 ERICH3Q5RHP9 1530 aa20.08■□□□□ 0.81
PCDHB6-201ENST00000231136 ARAP1Q96P48 1450 aa20.07■□□□□ 0.8
PCDHB6-201ENST00000231136 TARBP1Q13395 1621 aaKnown RBP20.05■□□□□ 0.8
PCDHB6-201ENST00000231136 APLP2Q06481 763 aa20.05■□□□□ 0.8
PCDHB6-201ENST00000231136 KANK4Q5T7N3 995 aaPredicted RBP20.03■□□□□ 0.8
PCDHB6-201ENST00000231136 ARHGAP35Q9NRY4 1499 aa20.01■□□□□ 0.79
PCDHB6-201ENST00000231136 VPS8Q8N3P4 1428 aa20.01■□□□□ 0.79
PCDHB6-201ENST00000231136 ARID3CA6NKF2 412 aa20■□□□□ 0.79
PCDHB6-201ENST00000231136 WDR62O43379 1518 aa19.99■□□□□ 0.79
PCDHB6-201ENST00000231136 WDR97A6NE52 1622 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms