RNA–Protein interactions for RNA: ENST00000311916.6

TWNK-201, Transcript of twinkle mtDNA helicase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TWNK, Length 3,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TWNK-201ENST00000311916 NISCHQ9Y2I1 1504 aa23.99■■□□□ 1.43
TWNK-201ENST00000311916 SHROOM4Q9ULL8 1493 aa20.8■□□□□ 0.92
TWNK-201ENST00000311916 DCAF8L2P0C7V8 631 aa20.5■□□□□ 0.87
TWNK-201ENST00000311916 SUPT5HO00267 1087 aaKnown RBP20.44■□□□□ 0.86
TWNK-201ENST00000311916 CCDC180Q9P1Z9 1646 aa20.29■□□□□ 0.84
TWNK-201ENST00000311916 ZCCHC6Q5VYS8 1495 aaKnown RBP20.22■□□□□ 0.83
TWNK-201ENST00000311916 ABCC9O60706 1549 aa19.99■□□□□ 0.79
TWNK-201ENST00000311916 CHIC1Q5VXU3 224 aa19.63■□□□□ 0.73
TWNK-201ENST00000311916 DCAF1Q9Y4B6 1507 aa19.53■□□□□ 0.72
TWNK-201ENST00000311916 MYO15BQ96JP2 1530 aa19.4■□□□□ 0.7
TWNK-201ENST00000311916 SCRIBQ14160 1630 aa19.24■□□□□ 0.67
TWNK-201ENST00000311916 LOC105371045A0A1W2PR82 267 aa19.18■□□□□ 0.66
TWNK-201ENST00000311916 PCGF6Q9BYE7 350 aa19.14■□□□□ 0.66
TWNK-201ENST00000311916 NACADO15069 1562 aa19.08■□□□□ 0.65
TWNK-201ENST00000311916 PABPN1Q86U42 306 aaKnown RBP eCLIP19.08■□□□□ 0.65
TWNK-201ENST00000311916 RB1CC1Q8TDY2 1594 aa19.03■□□□□ 0.64
TWNK-201ENST00000311916 RSF1Q96T23 1441 aaPredicted RBP19.02■□□□□ 0.64
TWNK-201ENST00000311916 TRIM41Q8WV44 630 aa18.98■□□□□ 0.63
TWNK-201ENST00000311916 FAM9AQ8IZU1 332 aaPredicted RBP18.95■□□□□ 0.62
TWNK-201ENST00000311916 HRCP23327 699 aa18.94■□□□□ 0.62
TWNK-201ENST00000311916 EHMT2Q96KQ7 1210 aa18.91■□□□□ 0.62
TWNK-201ENST00000311916 PELP1Q8IZL8 1130 aaKnown RBP18.84■□□□□ 0.61
TWNK-201ENST00000311916 CECR2Q9BXF3 1484 aa18.81■□□□□ 0.6
TWNK-201ENST00000311916 MROH2BQ7Z745 1585 aa18.69■□□□□ 0.58
TWNK-201ENST00000311916 TRIM26Q12899 539 aaPredicted RBP18.67■□□□□ 0.58
TWNK-201ENST00000311916 PPARGC1BQ86YN6 1023 aaKnown RBP18.67■□□□□ 0.58
TWNK-201ENST00000311916 MYT1Q01538 1121 aa18.66■□□□□ 0.58
TWNK-201ENST00000311916 WIZO95785 1651 aa18.58■□□□□ 0.56
TWNK-201ENST00000311916 UNC13AQ9UPW8 1703 aa18.57■□□□□ 0.56
TWNK-201ENST00000311916 BICRAQ9NZM4 1560 aa18.46■□□□□ 0.55
TWNK-201ENST00000311916 BAZ1AQ9NRL2 1556 aaPredicted RBP18.45■□□□□ 0.54
TWNK-201ENST00000311916 SLC24A1O60721 1099 aa18.35■□□□□ 0.53
TWNK-201ENST00000311916 SMARCA4P51532 1647 aa18.26■□□□□ 0.51
TWNK-201ENST00000311916 TTBK1Q5TCY1 1321 aaPredicted RBP18.26■□□□□ 0.51
TWNK-201ENST00000311916 CCDC88BA6NC98 1476 aa18.25■□□□□ 0.51
TWNK-201ENST00000311916 PRKCSHP14314 528 aaPredicted RBP18.25■□□□□ 0.51
TWNK-201ENST00000311916 ZEB1P37275 1124 aaPredicted RBP18.25■□□□□ 0.51
TWNK-201ENST00000311916 TOP2AP11388 1531 aaKnown RBP18.24■□□□□ 0.51
TWNK-201ENST00000311916 ABCC8Q09428 1581 aa18.22■□□□□ 0.51
TWNK-201ENST00000311916 UBTFP17480 764 aaKnown RBP18.16■□□□□ 0.5
TWNK-201ENST00000311916 SMARCA2P51531 1590 aa18.13■□□□□ 0.49
TWNK-201ENST00000311916 SOGA1O94964 1423 aa18.07■□□□□ 0.48
TWNK-201ENST00000311916 EIF4G1Q04637 1599 aaKnown RBP18.07■□□□□ 0.48
TWNK-201ENST00000311916 CSRNP3Q8WYN3 585 aa18.07■□□□□ 0.48
TWNK-201ENST00000311916 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.05■□□□□ 0.48
TWNK-201ENST00000311916 CCER1Q8TC90 406 aaPredicted RBP18.05■□□□□ 0.48
TWNK-201ENST00000311916 ATAD2BQ9ULI0 1458 aa17.97■□□□□ 0.47
TWNK-201ENST00000311916 CEP162Q5TB80 1403 aa17.96■□□□□ 0.47
TWNK-201ENST00000311916 RUSC2Q8N2Y8 1516 aa17.96■□□□□ 0.47
TWNK-201ENST00000311916 RANGAP1P46060 587 aaPredicted RBP17.96■□□□□ 0.47
TWNK-201ENST00000311916 WRNQ14191 1432 aaPredicted RBP eCLIP17.95■□□□□ 0.46
TWNK-201ENST00000311916 BAZ1BQ9UIG0 1483 aaKnown RBP17.94■□□□□ 0.46
TWNK-201ENST00000311916 TNIKQ9UKE5 1360 aa17.91■□□□□ 0.46
TWNK-201ENST00000311916 EEA1Q15075 1411 aa17.89■□□□□ 0.46
TWNK-201ENST00000311916 DNAJC5BQ9UF47 199 aa17.88■□□□□ 0.45
TWNK-201ENST00000311916 GOLGA3Q08378 1498 aa17.82■□□□□ 0.44
TWNK-201ENST00000311916 CC2D2AQ9P2K1 1620 aa17.8■□□□□ 0.44
TWNK-201ENST00000311916 APLP2Q06481 763 aa17.8■□□□□ 0.44
TWNK-201ENST00000311916 PEG3Q9GZU2 1588 aa17.78■□□□□ 0.44
TWNK-201ENST00000311916 SYNJ1O43426 1573 aa17.74■□□□□ 0.43
TWNK-201ENST00000311916 HNRNPUL2Q1KMD3 747 aaKnown RBP17.73■□□□□ 0.43
TWNK-201ENST00000311916 CEP164Q9UPV0 1460 aa17.72■□□□□ 0.43
TWNK-201ENST00000311916 NCAPD3P42695 1498 aa17.71■□□□□ 0.43
TWNK-201ENST00000311916 CLIP1P30622 1438 aa17.69■□□□□ 0.42
TWNK-201ENST00000311916 ERICH6Q7L0X2 663 aa17.63■□□□□ 0.41
TWNK-201ENST00000311916 RAPGEF2Q9Y4G8 1499 aa17.61■□□□□ 0.41
TWNK-201ENST00000311916 DIEXFQ68CQ4 756 aaKnown RBP17.57■□□□□ 0.4
TWNK-201ENST00000311916 HMGXB3Q12766 1538 aa17.55■□□□□ 0.4
TWNK-201ENST00000311916 KIF21BO75037 1637 aa17.55■□□□□ 0.4
TWNK-201ENST00000311916 VPS8Q8N3P4 1428 aa17.52■□□□□ 0.4
TWNK-201ENST00000311916 TOP2BQ02880 1626 aa17.49■□□□□ 0.39
TWNK-201ENST00000311916 NESP48681 1621 aa17.48■□□□□ 0.39
TWNK-201ENST00000311916 CADPSQ9ULU8 1353 aa17.43■□□□□ 0.38
TWNK-201ENST00000311916 SCAF1Q9H7N4 1312 aaKnown RBP17.42■□□□□ 0.38
TWNK-201ENST00000311916 ZNF316A6NFI3 1004 aaPredicted RBP17.42■□□□□ 0.38
TWNK-201ENST00000311916 KIF27Q86VH2 1401 aa17.42■□□□□ 0.38
TWNK-201ENST00000311916 CUX1P39880 1505 aa17.38■□□□□ 0.37
TWNK-201ENST00000311916 ITGAEP38570 1179 aa17.36■□□□□ 0.37
TWNK-201ENST00000311916 BIVM-ERCC5R4GMW8 1640 aa17.36■□□□□ 0.37
TWNK-201ENST00000311916 CENPBP07199 599 aaPredicted RBP17.35■□□□□ 0.37
TWNK-201ENST00000311916 KANK4Q5T7N3 995 aaPredicted RBP17.35■□□□□ 0.37
TWNK-201ENST00000311916 CFTRP13569 1480 aa17.34■□□□□ 0.37
TWNK-201ENST00000311916 PRXQ9BXM0 1461 aa17.34■□□□□ 0.37
TWNK-201ENST00000311916 BCL11AQ9H165 835 aa17.33■□□□□ 0.36
TWNK-201ENST00000311916 NEUROD1Q13562 356 aa17.32■□□□□ 0.36
TWNK-201ENST00000311916 ATP1B4Q9UN42 357 aaPredicted RBP17.32■□□□□ 0.36
TWNK-201ENST00000311916 ACIN1Q9UKV3 1341 aaKnown RBP17.32■□□□□ 0.36
TWNK-201ENST00000311916 YTHDC1Q96MU7 727 aaKnown RBP17.32■□□□□ 0.36
TWNK-201ENST00000311916 ERICH3Q5RHP9 1530 aa17.29■□□□□ 0.36
TWNK-201ENST00000311916 CUX2O14529 1486 aa17.29■□□□□ 0.36
TWNK-201ENST00000311916 ARAP1Q96P48 1450 aa17.27■□□□□ 0.35
TWNK-201ENST00000311916 DAXXQ9UER7 740 aaPredicted RBP17.26■□□□□ 0.35
TWNK-201ENST00000311916 FANCD2Q9BXW9 1451 aa17.26■□□□□ 0.35
TWNK-201ENST00000311916 P3H3Q8IVL6 736 aa17.25■□□□□ 0.35
TWNK-201ENST00000311916 IGF1RP08069 1367 aa17.2■□□□□ 0.34
TWNK-201ENST00000311916 CARMIL1Q5VZK9 1371 aa17.2■□□□□ 0.34
TWNK-201ENST00000311916 GTF3C3Q9Y5Q9 886 aa17.19■□□□□ 0.34
TWNK-201ENST00000311916 MIER1Q8N108 512 aa17.18■□□□□ 0.34
TWNK-201ENST00000311916 FGD5Q6ZNL6 1462 aa17.16■□□□□ 0.34
TWNK-201ENST00000311916 ARHGAP35Q9NRY4 1499 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms