Protein–RNA interactions for Protein: Q9P1Z2

CALCOCO1, Calcium-binding and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1Q9P1Z2 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CALCOCO1Q9P1Z2 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.78■□□□□ 0.44
CALCOCO1Q9P1Z2 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CALCOCO1Q9P1Z2 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CALCOCO1Q9P1Z2 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CALCOCO1Q9P1Z2 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CALCOCO1Q9P1Z2 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
CALCOCO1Q9P1Z2 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.77■□□□□ 0.44
CALCOCO1Q9P1Z2 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CALCOCO1Q9P1Z2 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CALCOCO1Q9P1Z2 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.77■□□□□ 0.44
CALCOCO1Q9P1Z2 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC17.77■□□□□ 0.44
CALCOCO1Q9P1Z2 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.77■□□□□ 0.44
CALCOCO1Q9P1Z2 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.77■□□□□ 0.44
CALCOCO1Q9P1Z2 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CALCOCO1Q9P1Z2 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC17.77■□□□□ 0.44
CALCOCO1Q9P1Z2 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CALCOCO1Q9P1Z2 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CALCOCO1Q9P1Z2 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC17.77■□□□□ 0.44
CALCOCO1Q9P1Z2 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC17.77■□□□□ 0.44
CALCOCO1Q9P1Z2 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CALCOCO1Q9P1Z2 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CALCOCO1Q9P1Z2 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.77■□□□□ 0.44
CALCOCO1Q9P1Z2 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.77■□□□□ 0.44
CALCOCO1Q9P1Z2 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.77■□□□□ 0.44
CALCOCO1Q9P1Z2 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.77■□□□□ 0.44
CALCOCO1Q9P1Z2 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.77■□□□□ 0.44
CALCOCO1Q9P1Z2 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.77■□□□□ 0.44
CALCOCO1Q9P1Z2 AC002347.1-201ENST00000569543 541 ntBASIC17.77■□□□□ 0.44
CALCOCO1Q9P1Z2 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.77■□□□□ 0.44
CALCOCO1Q9P1Z2 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
CALCOCO1Q9P1Z2 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CALCOCO1Q9P1Z2 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CALCOCO1Q9P1Z2 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CALCOCO1Q9P1Z2 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CALCOCO1Q9P1Z2 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CALCOCO1Q9P1Z2 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CALCOCO1Q9P1Z2 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CALCOCO1Q9P1Z2 FLJ16779-201ENST00000612722 7638 ntBASIC17.77■□□□□ 0.43
CALCOCO1Q9P1Z2 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC17.77■□□□□ 0.43
CALCOCO1Q9P1Z2 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CALCOCO1Q9P1Z2 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CALCOCO1Q9P1Z2 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
CALCOCO1Q9P1Z2 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CALCOCO1Q9P1Z2 AC002310.6-201ENST00000624451 1377 ntBASIC17.77■□□□□ 0.43
CALCOCO1Q9P1Z2 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
CALCOCO1Q9P1Z2 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CALCOCO1Q9P1Z2 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
CALCOCO1Q9P1Z2 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
CALCOCO1Q9P1Z2 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
CALCOCO1Q9P1Z2 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CALCOCO1Q9P1Z2 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CALCOCO1Q9P1Z2 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.76■□□□□ 0.43
CALCOCO1Q9P1Z2 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.76■□□□□ 0.43
CALCOCO1Q9P1Z2 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CALCOCO1Q9P1Z2 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CALCOCO1Q9P1Z2 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC17.76■□□□□ 0.43
CALCOCO1Q9P1Z2 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CALCOCO1Q9P1Z2 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CALCOCO1Q9P1Z2 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CALCOCO1Q9P1Z2 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC17.76■□□□□ 0.43
CALCOCO1Q9P1Z2 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CALCOCO1Q9P1Z2 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CALCOCO1Q9P1Z2 RPS8P6-201ENST00000426177 609 ntBASIC17.76■□□□□ 0.43
CALCOCO1Q9P1Z2 AC004832.2-201ENST00000426397 482 ntBASIC17.76■□□□□ 0.43
CALCOCO1Q9P1Z2 AC108751.1-201ENST00000490852 363 ntBASIC17.76■□□□□ 0.43
CALCOCO1Q9P1Z2 AC112482.1-201ENST00000492080 688 ntBASIC17.76■□□□□ 0.43
CALCOCO1Q9P1Z2 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.76■□□□□ 0.43
CALCOCO1Q9P1Z2 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.76■□□□□ 0.43
CALCOCO1Q9P1Z2 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.76■□□□□ 0.43
CALCOCO1Q9P1Z2 AC004790.2-201ENST00000623588 572 ntBASIC17.76■□□□□ 0.43
CALCOCO1Q9P1Z2 PGM5P2-202ENST00000637225 1043 ntBASIC17.76■□□□□ 0.43
CALCOCO1Q9P1Z2 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CALCOCO1Q9P1Z2 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC17.76■□□□□ 0.43
CALCOCO1Q9P1Z2 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CALCOCO1Q9P1Z2 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.76■□□□□ 0.43
CALCOCO1Q9P1Z2 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC17.76■□□□□ 0.43
CALCOCO1Q9P1Z2 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.76■□□□□ 0.43
CALCOCO1Q9P1Z2 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.76■□□□□ 0.43
CALCOCO1Q9P1Z2 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
CALCOCO1Q9P1Z2 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CALCOCO1Q9P1Z2 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CALCOCO1Q9P1Z2 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CALCOCO1Q9P1Z2 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CALCOCO1Q9P1Z2 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.75■□□□□ 0.43
CALCOCO1Q9P1Z2 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CALCOCO1Q9P1Z2 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CALCOCO1Q9P1Z2 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC17.75■□□□□ 0.43
CALCOCO1Q9P1Z2 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC17.75■□□□□ 0.43
CALCOCO1Q9P1Z2 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
CALCOCO1Q9P1Z2 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CALCOCO1Q9P1Z2 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CALCOCO1Q9P1Z2 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CALCOCO1Q9P1Z2 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CALCOCO1Q9P1Z2 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CALCOCO1Q9P1Z2 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CALCOCO1Q9P1Z2 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.75■□□□□ 0.43
CALCOCO1Q9P1Z2 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CALCOCO1Q9P1Z2 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
CALCOCO1Q9P1Z2 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms