Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
NKX6-2Q9C056 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX6-2Q9C056 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX6-2Q9C056 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX6-2Q9C056 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NKX6-2Q9C056 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX6-2Q9C056 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
NKX6-2Q9C056 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX6-2Q9C056 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC13.16□□□□□ -0.3
NKX6-2Q9C056 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NKX6-2Q9C056 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.16□□□□□ -0.3
NKX6-2Q9C056 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
NKX6-2Q9C056 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NKX6-2Q9C056 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.16□□□□□ -0.3
NKX6-2Q9C056 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
NKX6-2Q9C056 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NKX6-2Q9C056 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NKX6-2Q9C056 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NKX6-2Q9C056 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NKX6-2Q9C056 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC13.16□□□□□ -0.3
NKX6-2Q9C056 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NKX6-2Q9C056 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NKX6-2Q9C056 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
NKX6-2Q9C056 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NKX6-2Q9C056 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NKX6-2Q9C056 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NKX6-2Q9C056 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
NKX6-2Q9C056 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NKX6-2Q9C056 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NKX6-2Q9C056 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NKX6-2Q9C056 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
NKX6-2Q9C056 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.16□□□□□ -0.3
NKX6-2Q9C056 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
NKX6-2Q9C056 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.16□□□□□ -0.3
NKX6-2Q9C056 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NKX6-2Q9C056 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NKX6-2Q9C056 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC13.16□□□□□ -0.3
NKX6-2Q9C056 UBE2SP1-201ENST00000450587 669 ntBASIC13.16□□□□□ -0.3
NKX6-2Q9C056 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC13.16□□□□□ -0.3
NKX6-2Q9C056 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC13.16□□□□□ -0.3
NKX6-2Q9C056 RPS20-210ENST00000523936 899 ntTSL 2 BASIC13.16□□□□□ -0.3
NKX6-2Q9C056 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC13.16□□□□□ -0.3
NKX6-2Q9C056 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC13.16□□□□□ -0.3
NKX6-2Q9C056 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC13.16□□□□□ -0.3
NKX6-2Q9C056 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
NKX6-2Q9C056 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC13.16□□□□□ -0.3
NKX6-2Q9C056 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC13.16□□□□□ -0.3
NKX6-2Q9C056 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC13.16□□□□□ -0.3
NKX6-2Q9C056 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NKX6-2Q9C056 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
NKX6-2Q9C056 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NKX6-2Q9C056 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NKX6-2Q9C056 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
NKX6-2Q9C056 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.16□□□□□ -0.3
NKX6-2Q9C056 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NKX6-2Q9C056 AC097637.2-201ENST00000624096 1997 ntBASIC13.16□□□□□ -0.3
NKX6-2Q9C056 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NKX6-2Q9C056 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
NKX6-2Q9C056 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.16□□□□□ -0.3
NKX6-2Q9C056 AC069224.1-201ENST00000566372 1715 ntBASIC13.16□□□□□ -0.3
NKX6-2Q9C056 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NKX6-2Q9C056 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NKX6-2Q9C056 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NKX6-2Q9C056 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
NKX6-2Q9C056 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.16□□□□□ -0.3
NKX6-2Q9C056 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NKX6-2Q9C056 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NKX6-2Q9C056 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
NKX6-2Q9C056 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NKX6-2Q9C056 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
NKX6-2Q9C056 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NKX6-2Q9C056 AC136759.1-202ENST00000530858 2194 ntBASIC13.15□□□□□ -0.3
NKX6-2Q9C056 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
NKX6-2Q9C056 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NKX6-2Q9C056 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC13.15□□□□□ -0.3
NKX6-2Q9C056 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NKX6-2Q9C056 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.15□□□□□ -0.3
NKX6-2Q9C056 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.15□□□□□ -0.3
NKX6-2Q9C056 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.15□□□□□ -0.3
NKX6-2Q9C056 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
NKX6-2Q9C056 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NKX6-2Q9C056 AC148477.4-201ENST00000613430 1793 ntBASIC13.15□□□□□ -0.3
NKX6-2Q9C056 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.15□□□□□ -0.3
NKX6-2Q9C056 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
NKX6-2Q9C056 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NKX6-2Q9C056 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
NKX6-2Q9C056 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
NKX6-2Q9C056 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
NKX6-2Q9C056 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
NKX6-2Q9C056 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NKX6-2Q9C056 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
NKX6-2Q9C056 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.15□□□□□ -0.3
NKX6-2Q9C056 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
NKX6-2Q9C056 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
NKX6-2Q9C056 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC13.15□□□□□ -0.3
NKX6-2Q9C056 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
NKX6-2Q9C056 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NKX6-2Q9C056 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
NKX6-2Q9C056 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
NKX6-2Q9C056 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms