Protein–RNA interactions for Protein: Q8N9R6

CDRT4, CMT1A duplicated region transcript 4 protein, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT4Q8N9R6 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.04■□□□□ -0
CDRT4Q8N9R6 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
CDRT4Q8N9R6 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDRT4Q8N9R6 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.04■□□□□ -0
CDRT4Q8N9R6 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.04■□□□□ -0
CDRT4Q8N9R6 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.04■□□□□ -0
CDRT4Q8N9R6 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.04■□□□□ -0
CDRT4Q8N9R6 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.04■□□□□ -0
CDRT4Q8N9R6 AC011477.6-201ENST00000604980 1927 ntBASIC15.04■□□□□ -0
CDRT4Q8N9R6 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.04■□□□□ -0
CDRT4Q8N9R6 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDRT4Q8N9R6 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.03■□□□□ -0
CDRT4Q8N9R6 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDRT4Q8N9R6 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.03■□□□□ -0
CDRT4Q8N9R6 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDRT4Q8N9R6 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.03■□□□□ -0
CDRT4Q8N9R6 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.03■□□□□ -0
CDRT4Q8N9R6 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDRT4Q8N9R6 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CDRT4Q8N9R6 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.03■□□□□ -0
CDRT4Q8N9R6 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CDRT4Q8N9R6 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.03■□□□□ -0
CDRT4Q8N9R6 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDRT4Q8N9R6 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.03■□□□□ -0
CDRT4Q8N9R6 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDRT4Q8N9R6 UPF3AP3-201ENST00000420996 769 ntBASIC15.03■□□□□ -0
CDRT4Q8N9R6 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.03■□□□□ -0
CDRT4Q8N9R6 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.03■□□□□ -0
CDRT4Q8N9R6 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.03■□□□□ -0
CDRT4Q8N9R6 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.03■□□□□ -0
CDRT4Q8N9R6 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.03■□□□□ -0
CDRT4Q8N9R6 SLC25A39P2-201ENST00000537614 270 ntBASIC15.03■□□□□ -0
CDRT4Q8N9R6 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.03■□□□□ -0
CDRT4Q8N9R6 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.03■□□□□ -0
CDRT4Q8N9R6 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.03■□□□□ -0
CDRT4Q8N9R6 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.03■□□□□ -0
CDRT4Q8N9R6 AC010327.4-202ENST00000591484 748 ntBASIC15.03■□□□□ -0
CDRT4Q8N9R6 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.03■□□□□ -0
CDRT4Q8N9R6 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.03■□□□□ -0
CDRT4Q8N9R6 AL513210.1-201ENST00000629608 234 ntBASIC15.03■□□□□ -0
CDRT4Q8N9R6 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.03■□□□□ -0
CDRT4Q8N9R6 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.03■□□□□ -0
CDRT4Q8N9R6 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDRT4Q8N9R6 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CDRT4Q8N9R6 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDRT4Q8N9R6 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.03■□□□□ -0
CDRT4Q8N9R6 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDRT4Q8N9R6 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.03■□□□□ -0
CDRT4Q8N9R6 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.02■□□□□ -0
CDRT4Q8N9R6 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.02■□□□□ -0
CDRT4Q8N9R6 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDRT4Q8N9R6 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CDRT4Q8N9R6 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDRT4Q8N9R6 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.02■□□□□ -0
CDRT4Q8N9R6 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.02■□□□□ -0
CDRT4Q8N9R6 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
CDRT4Q8N9R6 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.02■□□□□ -0
CDRT4Q8N9R6 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDRT4Q8N9R6 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.02■□□□□ -0
CDRT4Q8N9R6 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDRT4Q8N9R6 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
CDRT4Q8N9R6 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.02■□□□□ -0
CDRT4Q8N9R6 AP005117.1-202ENST00000581724 1908 ntBASIC15.02■□□□□ -0
CDRT4Q8N9R6 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.02■□□□□ -0
CDRT4Q8N9R6 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDRT4Q8N9R6 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDRT4Q8N9R6 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.02■□□□□ -0
CDRT4Q8N9R6 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
CDRT4Q8N9R6 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
CDRT4Q8N9R6 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDRT4Q8N9R6 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDRT4Q8N9R6 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.02■□□□□ -0
CDRT4Q8N9R6 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDRT4Q8N9R6 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDRT4Q8N9R6 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.02■□□□□ -0
CDRT4Q8N9R6 RPSAP43-201ENST00000402237 625 ntBASIC15.02■□□□□ -0
CDRT4Q8N9R6 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.02■□□□□ -0
CDRT4Q8N9R6 AC005237.2-201ENST00000434368 219 ntBASIC15.02■□□□□ -0
CDRT4Q8N9R6 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.02■□□□□ -0
CDRT4Q8N9R6 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDRT4Q8N9R6 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.02■□□□□ -0
CDRT4Q8N9R6 AC112482.1-201ENST00000492080 688 ntBASIC15.02■□□□□ -0
CDRT4Q8N9R6 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.02■□□□□ -0
CDRT4Q8N9R6 AP000344.2-201ENST00000512987 629 ntBASIC15.02■□□□□ -0
CDRT4Q8N9R6 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.02■□□□□ -0
CDRT4Q8N9R6 AC243562.2-201ENST00000561247 970 ntBASIC15.02■□□□□ -0
CDRT4Q8N9R6 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.02■□□□□ -0
CDRT4Q8N9R6 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.02■□□□□ -0
CDRT4Q8N9R6 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
CDRT4Q8N9R6 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.02■□□□□ -0
CDRT4Q8N9R6 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
CDRT4Q8N9R6 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CDRT4Q8N9R6 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.02□□□□□ -0.01
CDRT4Q8N9R6 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
CDRT4Q8N9R6 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CDRT4Q8N9R6 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.02□□□□□ -0.01
CDRT4Q8N9R6 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
CDRT4Q8N9R6 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.02□□□□□ -0.01
CDRT4Q8N9R6 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CDRT4Q8N9R6 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms