Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.3■□□□□ 0.2
EFCAB3Q8N7B9 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
EFCAB3Q8N7B9 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
EFCAB3Q8N7B9 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EFCAB3Q8N7B9 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
EFCAB3Q8N7B9 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.3■□□□□ 0.2
EFCAB3Q8N7B9 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
EFCAB3Q8N7B9 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EFCAB3Q8N7B9 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.29■□□□□ 0.2
EFCAB3Q8N7B9 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
EFCAB3Q8N7B9 ME2P1-201ENST00000426028 1970 ntBASIC16.29■□□□□ 0.2
EFCAB3Q8N7B9 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
EFCAB3Q8N7B9 PLSCR2-205ENST00000497985 1441 ntTSL 2 BASIC16.29■□□□□ 0.2
EFCAB3Q8N7B9 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
EFCAB3Q8N7B9 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EFCAB3Q8N7B9 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EFCAB3Q8N7B9 AC126177.1-201ENST00000547829 2218 ntBASIC16.29■□□□□ 0.2
EFCAB3Q8N7B9 KRT18P28-201ENST00000453838 1332 ntBASIC16.29■□□□□ 0.2
EFCAB3Q8N7B9 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
EFCAB3Q8N7B9 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EFCAB3Q8N7B9 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
EFCAB3Q8N7B9 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EFCAB3Q8N7B9 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.29■□□□□ 0.2
EFCAB3Q8N7B9 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC16.29■□□□□ 0.2
EFCAB3Q8N7B9 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.29■□□□□ 0.2
EFCAB3Q8N7B9 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.29■□□□□ 0.2
EFCAB3Q8N7B9 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.29■□□□□ 0.2
EFCAB3Q8N7B9 AC012640.2-201ENST00000561606 901 ntBASIC16.29■□□□□ 0.2
EFCAB3Q8N7B9 AC025062.2-201ENST00000605477 670 ntBASIC16.29■□□□□ 0.2
EFCAB3Q8N7B9 MIR1199-201ENST00000621445 119 ntBASIC16.29■□□□□ 0.2
EFCAB3Q8N7B9 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.29■□□□□ 0.2
EFCAB3Q8N7B9 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EFCAB3Q8N7B9 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.29■□□□□ 0.2
EFCAB3Q8N7B9 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.29■□□□□ 0.2
EFCAB3Q8N7B9 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
EFCAB3Q8N7B9 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EFCAB3Q8N7B9 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EFCAB3Q8N7B9 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EFCAB3Q8N7B9 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.29■□□□□ 0.2
EFCAB3Q8N7B9 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.29■□□□□ 0.2
EFCAB3Q8N7B9 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
EFCAB3Q8N7B9 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
EFCAB3Q8N7B9 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EFCAB3Q8N7B9 GPR89P-201ENST00000407924 1495 ntBASIC16.29■□□□□ 0.2
EFCAB3Q8N7B9 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.28■□□□□ 0.2
EFCAB3Q8N7B9 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
EFCAB3Q8N7B9 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EFCAB3Q8N7B9 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.28■□□□□ 0.2
EFCAB3Q8N7B9 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.28■□□□□ 0.2
EFCAB3Q8N7B9 AC073347.1-201ENST00000421633 2643 ntBASIC16.28■□□□□ 0.2
EFCAB3Q8N7B9 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.28■□□□□ 0.2
EFCAB3Q8N7B9 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
EFCAB3Q8N7B9 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EFCAB3Q8N7B9 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
EFCAB3Q8N7B9 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.28■□□□□ 0.2
EFCAB3Q8N7B9 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EFCAB3Q8N7B9 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
EFCAB3Q8N7B9 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
EFCAB3Q8N7B9 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
EFCAB3Q8N7B9 AC023274.1-201ENST00000418278 595 ntBASIC16.28■□□□□ 0.2
EFCAB3Q8N7B9 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.28■□□□□ 0.2
EFCAB3Q8N7B9 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.28■□□□□ 0.2
EFCAB3Q8N7B9 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
EFCAB3Q8N7B9 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.28■□□□□ 0.2
EFCAB3Q8N7B9 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.28■□□□□ 0.2
EFCAB3Q8N7B9 METTL21AP1-201ENST00000438852 635 ntBASIC16.28■□□□□ 0.2
EFCAB3Q8N7B9 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.28■□□□□ 0.2
EFCAB3Q8N7B9 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.28■□□□□ 0.2
EFCAB3Q8N7B9 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
EFCAB3Q8N7B9 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC16.28■□□□□ 0.2
EFCAB3Q8N7B9 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.28■□□□□ 0.2
EFCAB3Q8N7B9 MIR3197-201ENST00000582241 73 ntBASIC16.28■□□□□ 0.2
EFCAB3Q8N7B9 AL596442.2-201ENST00000610240 980 ntBASIC16.28■□□□□ 0.2
EFCAB3Q8N7B9 AL589182.2-201ENST00000619332 1049 ntBASIC16.28■□□□□ 0.2
EFCAB3Q8N7B9 AL138960.2-201ENST00000625145 535 ntBASIC16.28■□□□□ 0.2
EFCAB3Q8N7B9 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
EFCAB3Q8N7B9 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC16.28■□□□□ 0.2
EFCAB3Q8N7B9 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
EFCAB3Q8N7B9 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EFCAB3Q8N7B9 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.28■□□□□ 0.2
EFCAB3Q8N7B9 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.28■□□□□ 0.2
EFCAB3Q8N7B9 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
EFCAB3Q8N7B9 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EFCAB3Q8N7B9 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
EFCAB3Q8N7B9 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.28■□□□□ 0.2
EFCAB3Q8N7B9 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
EFCAB3Q8N7B9 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
EFCAB3Q8N7B9 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.28■□□□□ 0.2
EFCAB3Q8N7B9 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EFCAB3Q8N7B9 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
EFCAB3Q8N7B9 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.28■□□□□ 0.2
EFCAB3Q8N7B9 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EFCAB3Q8N7B9 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
EFCAB3Q8N7B9 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
EFCAB3Q8N7B9 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
EFCAB3Q8N7B9 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
EFCAB3Q8N7B9 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
EFCAB3Q8N7B9 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.27■□□□□ 0.2
EFCAB3Q8N7B9 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
EFCAB3Q8N7B9 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms