Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC19.43■□□□□ 0.7
LMNB1P20700 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LMNB1P20700 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
LMNB1P20700 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
LMNB1P20700 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LMNB1P20700 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC19.43■□□□□ 0.7
LMNB1P20700 AL391256.1-201ENST00000443260 1855 ntBASIC19.43■□□□□ 0.7
LMNB1P20700 U82695.1-201ENST00000635752 1889 ntBASIC19.43■□□□□ 0.7
LMNB1P20700 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LMNB1P20700 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LMNB1P20700 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LMNB1P20700 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC19.43■□□□□ 0.7
LMNB1P20700 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.43■□□□□ 0.7
LMNB1P20700 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LMNB1P20700 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
LMNB1P20700 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
LMNB1P20700 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.42■□□□□ 0.7
LMNB1P20700 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC19.42■□□□□ 0.7
LMNB1P20700 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LMNB1P20700 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LMNB1P20700 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC19.42■□□□□ 0.7
LMNB1P20700 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
LMNB1P20700 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
LMNB1P20700 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
LMNB1P20700 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LMNB1P20700 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC19.42■□□□□ 0.7
LMNB1P20700 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.42■□□□□ 0.7
LMNB1P20700 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LMNB1P20700 BRF1-202ENST00000379932 884 ntTSL 5 BASIC19.42■□□□□ 0.7
LMNB1P20700 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LMNB1P20700 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC19.42■□□□□ 0.7
LMNB1P20700 REEP1-202ENST00000453231 940 ntTSL 2 BASIC19.42■□□□□ 0.7
LMNB1P20700 LDHBP1-201ENST00000455730 1119 ntBASIC19.42■□□□□ 0.7
LMNB1P20700 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LMNB1P20700 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC19.42■□□□□ 0.7
LMNB1P20700 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LMNB1P20700 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC19.42■□□□□ 0.7
LMNB1P20700 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC19.42■□□□□ 0.7
LMNB1P20700 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
LMNB1P20700 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
LMNB1P20700 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LMNB1P20700 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LMNB1P20700 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LMNB1P20700 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LMNB1P20700 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LMNB1P20700 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC19.41■□□□□ 0.7
LMNB1P20700 KRT8P19-201ENST00000551916 1455 ntBASIC19.41■□□□□ 0.7
LMNB1P20700 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LMNB1P20700 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.41■□□□□ 0.7
LMNB1P20700 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
LMNB1P20700 RHBDF1P1-201ENST00000427504 1941 ntBASIC19.41■□□□□ 0.7
LMNB1P20700 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LMNB1P20700 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
LMNB1P20700 GRN-214ENST00000589265 1632 ntTSL 5 BASIC19.41■□□□□ 0.7
LMNB1P20700 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LMNB1P20700 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
LMNB1P20700 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
LMNB1P20700 AC006001.1-201ENST00000325130 474 ntBASIC19.41■□□□□ 0.7
LMNB1P20700 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LMNB1P20700 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LMNB1P20700 AC004987.2-201ENST00000395959 1148 ntBASIC19.41■□□□□ 0.7
LMNB1P20700 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LMNB1P20700 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC19.41■□□□□ 0.7
LMNB1P20700 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LMNB1P20700 TARDBPP1-201ENST00000442013 1203 ntBASIC19.41■□□□□ 0.7
LMNB1P20700 EEF1DP4-201ENST00000446006 880 ntBASIC19.41■□□□□ 0.7
LMNB1P20700 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC19.41■□□□□ 0.7
LMNB1P20700 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC19.41■□□□□ 0.7
LMNB1P20700 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
LMNB1P20700 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LMNB1P20700 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LMNB1P20700 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC19.41■□□□□ 0.7
LMNB1P20700 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC19.41■□□□□ 0.7
LMNB1P20700 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LMNB1P20700 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LMNB1P20700 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LMNB1P20700 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
LMNB1P20700 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.41■□□□□ 0.7
LMNB1P20700 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LMNB1P20700 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LMNB1P20700 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LMNB1P20700 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LMNB1P20700 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
LMNB1P20700 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
LMNB1P20700 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LMNB1P20700 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC19.4■□□□□ 0.7
LMNB1P20700 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LMNB1P20700 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
LMNB1P20700 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LMNB1P20700 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LMNB1P20700 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LMNB1P20700 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LMNB1P20700 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC19.4■□□□□ 0.7
LMNB1P20700 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LMNB1P20700 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC19.4■□□□□ 0.7
LMNB1P20700 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC19.4■□□□□ 0.7
LMNB1P20700 RN7SL769P-201ENST00000469386 295 ntBASIC19.4■□□□□ 0.7
LMNB1P20700 HIST2H2BC-201ENST00000498492 580 ntBASIC19.4■□□□□ 0.7
LMNB1P20700 AC022137.2-201ENST00000503482 481 ntBASIC19.4■□□□□ 0.7
LMNB1P20700 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms