Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CD53P19397 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CD53P19397 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CD53P19397 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CD53P19397 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.04
CD53P19397 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.77□□□□□ -0.04
CD53P19397 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.77□□□□□ -0.04
CD53P19397 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.77□□□□□ -0.04
CD53P19397 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.77□□□□□ -0.04
CD53P19397 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CD53P19397 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
CD53P19397 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
CD53P19397 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.77□□□□□ -0.04
CD53P19397 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CD53P19397 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
CD53P19397 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.77□□□□□ -0.04
CD53P19397 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.77□□□□□ -0.04
CD53P19397 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CD53P19397 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.77□□□□□ -0.04
CD53P19397 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
CD53P19397 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
CD53P19397 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CD53P19397 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CD53P19397 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
CD53P19397 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CD53P19397 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.77□□□□□ -0.05
CD53P19397 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
CD53P19397 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.77□□□□□ -0.05
CD53P19397 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CD53P19397 LINC00982-205ENST00000420957 435 ntBASIC14.77□□□□□ -0.05
CD53P19397 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CD53P19397 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.77□□□□□ -0.05
CD53P19397 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.77□□□□□ -0.05
CD53P19397 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CD53P19397 HLA-J-203ENST00000494367 1087 ntBASIC14.77□□□□□ -0.05
CD53P19397 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.77□□□□□ -0.05
CD53P19397 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.77□□□□□ -0.05
CD53P19397 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.77□□□□□ -0.05
CD53P19397 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.77□□□□□ -0.05
CD53P19397 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.77□□□□□ -0.05
CD53P19397 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CD53P19397 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CD53P19397 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CD53P19397 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CD53P19397 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CD53P19397 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CD53P19397 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CD53P19397 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.05
CD53P19397 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
CD53P19397 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CD53P19397 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.05
CD53P19397 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CD53P19397 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CD53P19397 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.77□□□□□ -0.05
CD53P19397 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.77□□□□□ -0.05
CD53P19397 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CD53P19397 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CD53P19397 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.76□□□□□ -0.05
CD53P19397 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CD53P19397 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD53P19397 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.76□□□□□ -0.05
CD53P19397 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.76□□□□□ -0.05
CD53P19397 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.76□□□□□ -0.05
CD53P19397 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD53P19397 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.76□□□□□ -0.05
CD53P19397 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC14.76□□□□□ -0.05
CD53P19397 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CD53P19397 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.76□□□□□ -0.05
CD53P19397 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.76□□□□□ -0.05
CD53P19397 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.76□□□□□ -0.05
CD53P19397 AC025678.2-201ENST00000562061 970 ntBASIC14.76□□□□□ -0.05
CD53P19397 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.76□□□□□ -0.05
CD53P19397 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.76□□□□□ -0.05
CD53P19397 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.76□□□□□ -0.05
CD53P19397 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD53P19397 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD53P19397 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.76□□□□□ -0.05
CD53P19397 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CD53P19397 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD53P19397 AC010491.1-201ENST00000563101 2797 ntBASIC14.76□□□□□ -0.05
CD53P19397 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
CD53P19397 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.76□□□□□ -0.05
CD53P19397 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CD53P19397 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.76□□□□□ -0.05
CD53P19397 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CD53P19397 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD53P19397 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
CD53P19397 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD53P19397 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.76□□□□□ -0.05
CD53P19397 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD53P19397 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CD53P19397 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CD53P19397 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CD53P19397 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CD53P19397 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.75□□□□□ -0.05
CD53P19397 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CD53P19397 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.75□□□□□ -0.05
CD53P19397 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.75□□□□□ -0.05
CD53P19397 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CD53P19397 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms