Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.32□□□□□ -0.12
KDM4BO94953 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
KDM4BO94953 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
KDM4BO94953 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
KDM4BO94953 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
KDM4BO94953 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
KDM4BO94953 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
KDM4BO94953 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
KDM4BO94953 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
KDM4BO94953 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
KDM4BO94953 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
KDM4BO94953 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
KDM4BO94953 AL512652.2-201ENST00000625156 1716 ntBASIC14.32□□□□□ -0.12
KDM4BO94953 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
KDM4BO94953 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
KDM4BO94953 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
KDM4BO94953 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
KDM4BO94953 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
KDM4BO94953 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
KDM4BO94953 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
KDM4BO94953 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
KDM4BO94953 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
KDM4BO94953 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
KDM4BO94953 REXO1L8P-201ENST00000604378 1897 ntBASIC14.31□□□□□ -0.12
KDM4BO94953 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
KDM4BO94953 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
KDM4BO94953 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14.31□□□□□ -0.12
KDM4BO94953 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.31□□□□□ -0.12
KDM4BO94953 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.31□□□□□ -0.12
KDM4BO94953 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.31□□□□□ -0.12
KDM4BO94953 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
KDM4BO94953 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
KDM4BO94953 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.31□□□□□ -0.12
KDM4BO94953 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
KDM4BO94953 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.31□□□□□ -0.12
KDM4BO94953 AL031731.1-201ENST00000642131 2094 ntBASIC14.31□□□□□ -0.12
KDM4BO94953 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.31□□□□□ -0.12
KDM4BO94953 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
KDM4BO94953 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
KDM4BO94953 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
KDM4BO94953 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC14.31□□□□□ -0.12
KDM4BO94953 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
KDM4BO94953 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
KDM4BO94953 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
KDM4BO94953 SKP2-204ENST00000508514 821 ntTSL 3 BASIC14.31□□□□□ -0.12
KDM4BO94953 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC14.31□□□□□ -0.12
KDM4BO94953 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
KDM4BO94953 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC14.31□□□□□ -0.12
KDM4BO94953 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC14.31□□□□□ -0.12
KDM4BO94953 SDCCAG3P1-201ENST00000589292 1150 ntBASIC14.31□□□□□ -0.12
KDM4BO94953 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC14.31□□□□□ -0.12
KDM4BO94953 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
KDM4BO94953 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.31□□□□□ -0.12
KDM4BO94953 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
KDM4BO94953 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.31□□□□□ -0.12
KDM4BO94953 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
KDM4BO94953 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
KDM4BO94953 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
KDM4BO94953 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
KDM4BO94953 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
KDM4BO94953 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
KDM4BO94953 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
KDM4BO94953 AC002310.6-201ENST00000624451 1377 ntBASIC14.31□□□□□ -0.12
KDM4BO94953 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
KDM4BO94953 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
KDM4BO94953 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
KDM4BO94953 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
KDM4BO94953 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
KDM4BO94953 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
KDM4BO94953 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
KDM4BO94953 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
KDM4BO94953 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.31□□□□□ -0.12
KDM4BO94953 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
KDM4BO94953 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.31□□□□□ -0.12
KDM4BO94953 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
KDM4BO94953 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.31□□□□□ -0.12
KDM4BO94953 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
KDM4BO94953 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
KDM4BO94953 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
KDM4BO94953 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
KDM4BO94953 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
KDM4BO94953 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.3□□□□□ -0.12
KDM4BO94953 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.3□□□□□ -0.12
KDM4BO94953 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KDM4BO94953 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KDM4BO94953 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC14.3□□□□□ -0.12
KDM4BO94953 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.3□□□□□ -0.12
KDM4BO94953 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KDM4BO94953 AKR1C7P-201ENST00000305623 895 ntBASIC14.3□□□□□ -0.12
KDM4BO94953 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KDM4BO94953 SAPCD2P3-201ENST00000455031 850 ntBASIC14.3□□□□□ -0.12
KDM4BO94953 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC14.3□□□□□ -0.12
KDM4BO94953 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC14.3□□□□□ -0.12
KDM4BO94953 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
KDM4BO94953 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
KDM4BO94953 LINC01711-201ENST00000598340 967 ntBASIC14.3□□□□□ -0.12
KDM4BO94953 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC14.3□□□□□ -0.12
KDM4BO94953 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.3□□□□□ -0.12
KDM4BO94953 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
KDM4BO94953 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms