Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC14.43□□□□□ -0.1
RFT1Q96AA3 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RFT1Q96AA3 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RFT1Q96AA3 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RFT1Q96AA3 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.43□□□□□ -0.1
RFT1Q96AA3 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RFT1Q96AA3 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RFT1Q96AA3 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RFT1Q96AA3 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.43□□□□□ -0.1
RFT1Q96AA3 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
RFT1Q96AA3 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RFT1Q96AA3 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RFT1Q96AA3 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RFT1Q96AA3 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RFT1Q96AA3 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.43□□□□□ -0.1
RFT1Q96AA3 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.43□□□□□ -0.1
RFT1Q96AA3 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.43□□□□□ -0.1
RFT1Q96AA3 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
RFT1Q96AA3 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
RFT1Q96AA3 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
RFT1Q96AA3 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.42□□□□□ -0.1
RFT1Q96AA3 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RFT1Q96AA3 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RFT1Q96AA3 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RFT1Q96AA3 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RFT1Q96AA3 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RFT1Q96AA3 AC006486.2-201ENST00000624246 2199 ntBASIC14.42□□□□□ -0.1
RFT1Q96AA3 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RFT1Q96AA3 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
RFT1Q96AA3 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RFT1Q96AA3 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RFT1Q96AA3 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RFT1Q96AA3 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
RFT1Q96AA3 MIR1224-201ENST00000408193 85 ntBASIC14.42□□□□□ -0.1
RFT1Q96AA3 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
RFT1Q96AA3 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
RFT1Q96AA3 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RFT1Q96AA3 SART3-203ENST00000546611 1184 ntBASIC14.42□□□□□ -0.1
RFT1Q96AA3 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC14.42□□□□□ -0.1
RFT1Q96AA3 SDCCAG3P1-201ENST00000589292 1150 ntBASIC14.42□□□□□ -0.1
RFT1Q96AA3 AC008608.2-201ENST00000606089 416 ntBASIC14.42□□□□□ -0.1
RFT1Q96AA3 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RFT1Q96AA3 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.42□□□□□ -0.1
RFT1Q96AA3 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.42□□□□□ -0.1
RFT1Q96AA3 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RFT1Q96AA3 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RFT1Q96AA3 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
RFT1Q96AA3 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RFT1Q96AA3 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RFT1Q96AA3 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC14.42□□□□□ -0.1
RFT1Q96AA3 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RFT1Q96AA3 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.42□□□□□ -0.1
RFT1Q96AA3 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.42□□□□□ -0.1
RFT1Q96AA3 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RFT1Q96AA3 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RFT1Q96AA3 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
RFT1Q96AA3 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RFT1Q96AA3 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RFT1Q96AA3 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.41□□□□□ -0.1
RFT1Q96AA3 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RFT1Q96AA3 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RFT1Q96AA3 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.41□□□□□ -0.1
RFT1Q96AA3 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RFT1Q96AA3 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RFT1Q96AA3 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RFT1Q96AA3 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RFT1Q96AA3 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
RFT1Q96AA3 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RFT1Q96AA3 AC097376.2-205ENST00000610159 5334 ntBASIC14.41□□□□□ -0.1
RFT1Q96AA3 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RFT1Q96AA3 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC14.41□□□□□ -0.1
RFT1Q96AA3 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RFT1Q96AA3 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
RFT1Q96AA3 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RFT1Q96AA3 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RFT1Q96AA3 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RFT1Q96AA3 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.41□□□□□ -0.1
RFT1Q96AA3 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC14.41□□□□□ -0.1
RFT1Q96AA3 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RFT1Q96AA3 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RFT1Q96AA3 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RFT1Q96AA3 RBM17P3-201ENST00000417687 1192 ntBASIC14.41□□□□□ -0.1
RFT1Q96AA3 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RFT1Q96AA3 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RFT1Q96AA3 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.41□□□□□ -0.1
RFT1Q96AA3 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.41□□□□□ -0.1
RFT1Q96AA3 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC14.41□□□□□ -0.1
RFT1Q96AA3 TPM1-226ENST00000560959 925 ntTSL 2 BASIC14.41□□□□□ -0.1
RFT1Q96AA3 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
RFT1Q96AA3 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.41□□□□□ -0.1
RFT1Q96AA3 RNF151-202ENST00000569210 853 ntTSL 2 BASIC14.41□□□□□ -0.1
RFT1Q96AA3 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC14.41□□□□□ -0.1
RFT1Q96AA3 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC14.41□□□□□ -0.1
RFT1Q96AA3 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.41□□□□□ -0.1
RFT1Q96AA3 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC14.41□□□□□ -0.1
RFT1Q96AA3 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.41□□□□□ -0.1
RFT1Q96AA3 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.41□□□□□ -0.1
RFT1Q96AA3 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RFT1Q96AA3 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RFT1Q96AA3 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms