Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLDND2Q8NHS1 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
CLDND2Q8NHS1 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLDND2Q8NHS1 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.83□□□□□ -0.2
CLDND2Q8NHS1 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLDND2Q8NHS1 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC13.83□□□□□ -0.2
CLDND2Q8NHS1 CD81-202ENST00000381036 880 ntTSL 3 BASIC13.83□□□□□ -0.2
CLDND2Q8NHS1 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.83□□□□□ -0.2
CLDND2Q8NHS1 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLDND2Q8NHS1 TREML5P-201ENST00000421694 576 ntBASIC13.83□□□□□ -0.2
CLDND2Q8NHS1 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC13.83□□□□□ -0.2
CLDND2Q8NHS1 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC13.83□□□□□ -0.2
CLDND2Q8NHS1 BASP1P1-201ENST00000430708 665 ntBASIC13.83□□□□□ -0.2
CLDND2Q8NHS1 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC13.83□□□□□ -0.2
CLDND2Q8NHS1 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC13.83□□□□□ -0.2
CLDND2Q8NHS1 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC13.83□□□□□ -0.2
CLDND2Q8NHS1 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC13.83□□□□□ -0.2
CLDND2Q8NHS1 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CLDND2Q8NHS1 IGHV3-42-201ENST00000520410 361 ntBASIC13.83□□□□□ -0.2
CLDND2Q8NHS1 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC13.83□□□□□ -0.2
CLDND2Q8NHS1 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC13.83□□□□□ -0.2
CLDND2Q8NHS1 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC13.83□□□□□ -0.2
CLDND2Q8NHS1 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC13.83□□□□□ -0.2
CLDND2Q8NHS1 SIGLEC29P-201ENST00000599873 1114 ntBASIC13.83□□□□□ -0.2
CLDND2Q8NHS1 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CLDND2Q8NHS1 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLDND2Q8NHS1 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLDND2Q8NHS1 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CLDND2Q8NHS1 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLDND2Q8NHS1 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC13.83□□□□□ -0.2
CLDND2Q8NHS1 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLDND2Q8NHS1 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLDND2Q8NHS1 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLDND2Q8NHS1 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
CLDND2Q8NHS1 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLDND2Q8NHS1 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
CLDND2Q8NHS1 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CLDND2Q8NHS1 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLDND2Q8NHS1 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
CLDND2Q8NHS1 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLDND2Q8NHS1 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CLDND2Q8NHS1 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLDND2Q8NHS1 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLDND2Q8NHS1 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLDND2Q8NHS1 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLDND2Q8NHS1 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLDND2Q8NHS1 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC13.82□□□□□ -0.2
CLDND2Q8NHS1 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLDND2Q8NHS1 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLDND2Q8NHS1 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CLDND2Q8NHS1 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLDND2Q8NHS1 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CLDND2Q8NHS1 BID-213ENST00000615414 2236 ntTSL 5 BASIC13.82□□□□□ -0.2
CLDND2Q8NHS1 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CLDND2Q8NHS1 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CLDND2Q8NHS1 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
CLDND2Q8NHS1 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLDND2Q8NHS1 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLDND2Q8NHS1 STK24-203ENST00000397517 4578 ntTSL 2 BASIC13.82□□□□□ -0.2
CLDND2Q8NHS1 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
CLDND2Q8NHS1 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLDND2Q8NHS1 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLDND2Q8NHS1 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CLDND2Q8NHS1 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
CLDND2Q8NHS1 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC13.82□□□□□ -0.2
CLDND2Q8NHS1 LHX6-205ENST00000464484 666 ntTSL 2 BASIC13.82□□□□□ -0.2
CLDND2Q8NHS1 INGX-202ENST00000489074 768 ntBASIC13.82□□□□□ -0.2
CLDND2Q8NHS1 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CLDND2Q8NHS1 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC13.82□□□□□ -0.2
CLDND2Q8NHS1 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC13.82□□□□□ -0.2
CLDND2Q8NHS1 AC105233.2-201ENST00000523697 349 ntBASIC13.82□□□□□ -0.2
CLDND2Q8NHS1 AF228730.5-201ENST00000530288 346 ntBASIC13.82□□□□□ -0.2
CLDND2Q8NHS1 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC13.82□□□□□ -0.2
CLDND2Q8NHS1 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC13.82□□□□□ -0.2
CLDND2Q8NHS1 GREM1-201ENST00000560677 623 ntTSL 4 BASIC13.82□□□□□ -0.2
CLDND2Q8NHS1 MIR4745-201ENST00000577608 62 ntBASIC13.82□□□□□ -0.2
CLDND2Q8NHS1 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC13.82□□□□□ -0.2
CLDND2Q8NHS1 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC13.82□□□□□ -0.2
CLDND2Q8NHS1 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC13.82□□□□□ -0.2
CLDND2Q8NHS1 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.82□□□□□ -0.2
CLDND2Q8NHS1 AJ011932.1-201ENST00000621707 465 ntBASIC13.82□□□□□ -0.2
CLDND2Q8NHS1 AL365203.3-201ENST00000609742 2057 ntBASIC13.82□□□□□ -0.2
CLDND2Q8NHS1 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLDND2Q8NHS1 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
CLDND2Q8NHS1 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLDND2Q8NHS1 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC13.82□□□□□ -0.2
CLDND2Q8NHS1 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CLDND2Q8NHS1 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CLDND2Q8NHS1 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLDND2Q8NHS1 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLDND2Q8NHS1 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CLDND2Q8NHS1 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLDND2Q8NHS1 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CLDND2Q8NHS1 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLDND2Q8NHS1 FO538757.1-201ENST00000623083 1397 ntBASIC13.82□□□□□ -0.2
CLDND2Q8NHS1 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CLDND2Q8NHS1 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC13.82□□□□□ -0.2
CLDND2Q8NHS1 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLDND2Q8NHS1 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDND2Q8NHS1 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms