Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRRTM1Q86UE6 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.12□□□□□ -0.15
LRRTM1Q86UE6 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRRTM1Q86UE6 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LRRTM1Q86UE6 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRRTM1Q86UE6 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRRTM1Q86UE6 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRRTM1Q86UE6 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRRTM1Q86UE6 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.12□□□□□ -0.15
LRRTM1Q86UE6 AC126755.1-201ENST00000525846 6405 ntBASIC14.12□□□□□ -0.15
LRRTM1Q86UE6 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
LRRTM1Q86UE6 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
LRRTM1Q86UE6 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LRRTM1Q86UE6 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
LRRTM1Q86UE6 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRRTM1Q86UE6 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRRTM1Q86UE6 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRRTM1Q86UE6 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRRTM1Q86UE6 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRRTM1Q86UE6 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.11□□□□□ -0.15
LRRTM1Q86UE6 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.11□□□□□ -0.15
LRRTM1Q86UE6 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
LRRTM1Q86UE6 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
LRRTM1Q86UE6 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.11□□□□□ -0.15
LRRTM1Q86UE6 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRRTM1Q86UE6 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.11□□□□□ -0.15
LRRTM1Q86UE6 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRRTM1Q86UE6 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
LRRTM1Q86UE6 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LRRTM1Q86UE6 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LRRTM1Q86UE6 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRRTM1Q86UE6 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.11□□□□□ -0.15
LRRTM1Q86UE6 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
LRRTM1Q86UE6 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRRTM1Q86UE6 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRRTM1Q86UE6 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRRTM1Q86UE6 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.11□□□□□ -0.15
LRRTM1Q86UE6 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
LRRTM1Q86UE6 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.11□□□□□ -0.15
LRRTM1Q86UE6 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRRTM1Q86UE6 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
LRRTM1Q86UE6 DUSP5P1-201ENST00000441325 1139 ntBASIC14.11□□□□□ -0.15
LRRTM1Q86UE6 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
LRRTM1Q86UE6 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.11□□□□□ -0.15
LRRTM1Q86UE6 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
LRRTM1Q86UE6 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRRTM1Q86UE6 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LRRTM1Q86UE6 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC14.11□□□□□ -0.15
LRRTM1Q86UE6 AC006557.2-201ENST00000592985 1240 ntBASIC14.11□□□□□ -0.15
LRRTM1Q86UE6 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.11□□□□□ -0.15
LRRTM1Q86UE6 AC087481.3-201ENST00000602886 1894 ntBASIC14.11□□□□□ -0.15
LRRTM1Q86UE6 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LRRTM1Q86UE6 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LRRTM1Q86UE6 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC14.11□□□□□ -0.15
LRRTM1Q86UE6 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
LRRTM1Q86UE6 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LRRTM1Q86UE6 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
LRRTM1Q86UE6 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LRRTM1Q86UE6 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LRRTM1Q86UE6 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
LRRTM1Q86UE6 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRRTM1Q86UE6 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.11□□□□□ -0.15
LRRTM1Q86UE6 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRRTM1Q86UE6 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LRRTM1Q86UE6 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LRRTM1Q86UE6 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.1□□□□□ -0.15
LRRTM1Q86UE6 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.1□□□□□ -0.15
LRRTM1Q86UE6 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.1□□□□□ -0.15
LRRTM1Q86UE6 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
LRRTM1Q86UE6 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
LRRTM1Q86UE6 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LRRTM1Q86UE6 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.1□□□□□ -0.15
LRRTM1Q86UE6 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LRRTM1Q86UE6 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
LRRTM1Q86UE6 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LRRTM1Q86UE6 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
LRRTM1Q86UE6 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.1□□□□□ -0.15
LRRTM1Q86UE6 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.1□□□□□ -0.15
LRRTM1Q86UE6 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LRRTM1Q86UE6 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LRRTM1Q86UE6 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LRRTM1Q86UE6 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LRRTM1Q86UE6 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.1□□□□□ -0.15
LRRTM1Q86UE6 LAGE3P1-201ENST00000425356 484 ntBASIC14.1□□□□□ -0.15
LRRTM1Q86UE6 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
LRRTM1Q86UE6 NMU-205ENST00000511469 756 ntTSL 3 BASIC14.1□□□□□ -0.15
LRRTM1Q86UE6 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.1□□□□□ -0.15
LRRTM1Q86UE6 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.1□□□□□ -0.15
LRRTM1Q86UE6 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LRRTM1Q86UE6 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
LRRTM1Q86UE6 PAM16-208ENST00000573553 722 ntTSL 2 BASIC14.1□□□□□ -0.15
LRRTM1Q86UE6 AC008608.2-201ENST00000606089 416 ntBASIC14.1□□□□□ -0.15
LRRTM1Q86UE6 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC14.1□□□□□ -0.15
LRRTM1Q86UE6 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.1□□□□□ -0.15
LRRTM1Q86UE6 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
LRRTM1Q86UE6 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LRRTM1Q86UE6 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LRRTM1Q86UE6 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
LRRTM1Q86UE6 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
LRRTM1Q86UE6 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms