Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.28□□□□□ -0.12
SEC61A1P61619 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC14.28□□□□□ -0.12
SEC61A1P61619 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SEC61A1P61619 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SEC61A1P61619 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.28□□□□□ -0.12
SEC61A1P61619 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.28□□□□□ -0.12
SEC61A1P61619 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.28□□□□□ -0.12
SEC61A1P61619 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SEC61A1P61619 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.28□□□□□ -0.12
SEC61A1P61619 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.28□□□□□ -0.12
SEC61A1P61619 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SEC61A1P61619 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.28□□□□□ -0.12
SEC61A1P61619 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
SEC61A1P61619 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC14.28□□□□□ -0.12
SEC61A1P61619 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.28□□□□□ -0.12
SEC61A1P61619 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.28□□□□□ -0.12
SEC61A1P61619 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.28□□□□□ -0.12
SEC61A1P61619 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
SEC61A1P61619 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
SEC61A1P61619 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.28□□□□□ -0.12
SEC61A1P61619 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
SEC61A1P61619 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.28□□□□□ -0.12
SEC61A1P61619 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SEC61A1P61619 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.28□□□□□ -0.12
SEC61A1P61619 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
SEC61A1P61619 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.28□□□□□ -0.12
SEC61A1P61619 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.27□□□□□ -0.12
SEC61A1P61619 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.27□□□□□ -0.12
SEC61A1P61619 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.27□□□□□ -0.12
SEC61A1P61619 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SEC61A1P61619 AC013268.4-201ENST00000637413 2228 ntBASIC14.27□□□□□ -0.12
SEC61A1P61619 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SEC61A1P61619 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SEC61A1P61619 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
SEC61A1P61619 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SEC61A1P61619 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SEC61A1P61619 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.27□□□□□ -0.12
SEC61A1P61619 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.27□□□□□ -0.12
SEC61A1P61619 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
SEC61A1P61619 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SEC61A1P61619 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SEC61A1P61619 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SEC61A1P61619 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SEC61A1P61619 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SEC61A1P61619 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SEC61A1P61619 MRPL20P1-201ENST00000400819 433 ntBASIC14.27□□□□□ -0.13
SEC61A1P61619 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
SEC61A1P61619 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.27□□□□□ -0.13
SEC61A1P61619 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SEC61A1P61619 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.27□□□□□ -0.13
SEC61A1P61619 VN2R19P-201ENST00000442399 1052 ntBASIC14.27□□□□□ -0.13
SEC61A1P61619 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.27□□□□□ -0.13
SEC61A1P61619 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.27□□□□□ -0.13
SEC61A1P61619 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.27□□□□□ -0.13
SEC61A1P61619 OR7E47P-204ENST00000575924 449 ntBASIC14.27□□□□□ -0.13
SEC61A1P61619 AC006538.3-201ENST00000612495 578 ntBASIC14.27□□□□□ -0.13
SEC61A1P61619 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SEC61A1P61619 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.27□□□□□ -0.13
SEC61A1P61619 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SEC61A1P61619 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SEC61A1P61619 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SEC61A1P61619 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SEC61A1P61619 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SEC61A1P61619 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SEC61A1P61619 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
SEC61A1P61619 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SEC61A1P61619 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.27□□□□□ -0.13
SEC61A1P61619 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
SEC61A1P61619 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SEC61A1P61619 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SEC61A1P61619 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SEC61A1P61619 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.26□□□□□ -0.13
SEC61A1P61619 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SEC61A1P61619 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SEC61A1P61619 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SEC61A1P61619 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.26□□□□□ -0.13
SEC61A1P61619 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
SEC61A1P61619 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.26□□□□□ -0.13
SEC61A1P61619 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SEC61A1P61619 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SEC61A1P61619 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SEC61A1P61619 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SEC61A1P61619 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SEC61A1P61619 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
SEC61A1P61619 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SEC61A1P61619 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SEC61A1P61619 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
SEC61A1P61619 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SEC61A1P61619 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SEC61A1P61619 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.26□□□□□ -0.13
SEC61A1P61619 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SEC61A1P61619 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SEC61A1P61619 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SEC61A1P61619 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SEC61A1P61619 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
SEC61A1P61619 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SEC61A1P61619 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SEC61A1P61619 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.26□□□□□ -0.13
SEC61A1P61619 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
SEC61A1P61619 IGLL3P-201ENST00000412472 434 ntBASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms