Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.14■□□□□ 0.33
PCK1P35558 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
PCK1P35558 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCK1P35558 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCK1P35558 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.14■□□□□ 0.33
PCK1P35558 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCK1P35558 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCK1P35558 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCK1P35558 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCK1P35558 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCK1P35558 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCK1P35558 WASH6P-202ENST00000359512 1437 ntBASIC17.13■□□□□ 0.33
PCK1P35558 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.13■□□□□ 0.33
PCK1P35558 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCK1P35558 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCK1P35558 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCK1P35558 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCK1P35558 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
PCK1P35558 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.13■□□□□ 0.33
PCK1P35558 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.13■□□□□ 0.33
PCK1P35558 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.13■□□□□ 0.33
PCK1P35558 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.13■□□□□ 0.33
PCK1P35558 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCK1P35558 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCK1P35558 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCK1P35558 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCK1P35558 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
PCK1P35558 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.13■□□□□ 0.33
PCK1P35558 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCK1P35558 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.13■□□□□ 0.33
PCK1P35558 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
PCK1P35558 AC002056.1-201ENST00000395613 760 ntBASIC17.13■□□□□ 0.33
PCK1P35558 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.13■□□□□ 0.33
PCK1P35558 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
PCK1P35558 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PCK1P35558 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCK1P35558 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
PCK1P35558 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.13■□□□□ 0.33
PCK1P35558 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.13■□□□□ 0.33
PCK1P35558 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.13■□□□□ 0.33
PCK1P35558 AC092865.6-201ENST00000642101 219 ntBASIC17.13■□□□□ 0.33
PCK1P35558 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
PCK1P35558 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCK1P35558 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCK1P35558 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.13■□□□□ 0.33
PCK1P35558 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC17.13■□□□□ 0.33
PCK1P35558 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCK1P35558 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCK1P35558 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.13■□□□□ 0.33
PCK1P35558 AC105917.1-201ENST00000506637 2539 ntBASIC17.13■□□□□ 0.33
PCK1P35558 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCK1P35558 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCK1P35558 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCK1P35558 AC022188.1-201ENST00000620960 1664 ntBASIC17.13■□□□□ 0.33
PCK1P35558 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCK1P35558 CASK-202ENST00000378158 3848 ntTSL 5 BASIC17.13■□□□□ 0.33
PCK1P35558 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCK1P35558 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PCK1P35558 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PCK1P35558 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCK1P35558 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCK1P35558 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
PCK1P35558 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCK1P35558 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCK1P35558 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC17.12■□□□□ 0.33
PCK1P35558 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCK1P35558 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCK1P35558 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCK1P35558 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCK1P35558 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.12■□□□□ 0.33
PCK1P35558 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCK1P35558 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PCK1P35558 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC17.12■□□□□ 0.33
PCK1P35558 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCK1P35558 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCK1P35558 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCK1P35558 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCK1P35558 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCK1P35558 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCK1P35558 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCK1P35558 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PCK1P35558 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.12■□□□□ 0.33
PCK1P35558 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.12■□□□□ 0.33
PCK1P35558 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCK1P35558 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
PCK1P35558 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.12■□□□□ 0.33
PCK1P35558 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCK1P35558 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCK1P35558 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCK1P35558 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PCK1P35558 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCK1P35558 PAUPAR-201ENST00000630360 2965 ntBASIC17.12■□□□□ 0.33
PCK1P35558 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.12■□□□□ 0.33
PCK1P35558 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.12■□□□□ 0.33
PCK1P35558 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.12■□□□□ 0.33
PCK1P35558 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PCK1P35558 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCK1P35558 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
PCK1P35558 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.11■□□□□ 0.33
PCK1P35558 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms