Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC10.95□□□□□ -0.66
SNCGO76070 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC10.95□□□□□ -0.66
SNCGO76070 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC10.95□□□□□ -0.66
SNCGO76070 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC10.95□□□□□ -0.66
SNCGO76070 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SNCGO76070 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC10.95□□□□□ -0.66
SNCGO76070 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SNCGO76070 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC10.95□□□□□ -0.66
SNCGO76070 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC10.95□□□□□ -0.66
SNCGO76070 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SNCGO76070 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
SNCGO76070 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SNCGO76070 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC10.95□□□□□ -0.66
SNCGO76070 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SNCGO76070 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SNCGO76070 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
SNCGO76070 BEND3P1-201ENST00000421591 1944 ntBASIC10.95□□□□□ -0.66
SNCGO76070 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
SNCGO76070 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC10.95□□□□□ -0.66
SNCGO76070 GATAD2A-201ENST00000358713 5510 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
SNCGO76070 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SNCGO76070 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SNCGO76070 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC10.95□□□□□ -0.66
SNCGO76070 KIAA0319-205ENST00000543707 5314 ntAPPRIS P3 TSL 5 BASIC10.95□□□□□ -0.66
SNCGO76070 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
SNCGO76070 APP-205ENST00000358918 2366 ntTSL 5 BASIC10.95□□□□□ -0.66
SNCGO76070 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SNCGO76070 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SNCGO76070 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC10.95□□□□□ -0.66
SNCGO76070 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SNCGO76070 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC10.95□□□□□ -0.66
SNCGO76070 COL11A1-210ENST00000512756 5442 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SNCGO76070 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
SNCGO76070 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC10.94□□□□□ -0.66
SNCGO76070 ZNF142-205ENST00000449707 5909 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SNCGO76070 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC10.94□□□□□ -0.66
SNCGO76070 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC10.94□□□□□ -0.66
SNCGO76070 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC10.94□□□□□ -0.66
SNCGO76070 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
SNCGO76070 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
SNCGO76070 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
SNCGO76070 FSCN1P1-201ENST00000568912 1481 ntBASIC10.94□□□□□ -0.66
SNCGO76070 GRM4-202ENST00000374181 7275 ntTSL 5 BASIC10.94□□□□□ -0.66
SNCGO76070 NPLOC4-202ENST00000374747 5538 ntTSL 2 BASIC10.94□□□□□ -0.66
SNCGO76070 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SNCGO76070 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
SNCGO76070 ADAMTS20-201ENST00000389420 6076 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SNCGO76070 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC10.94□□□□□ -0.66
SNCGO76070 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC10.94□□□□□ -0.66
SNCGO76070 HERC2P3-204ENST00000426501 5995 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SNCGO76070 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
SNCGO76070 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
SNCGO76070 PCDHA5-203ENST00000614258 4248 ntBASIC10.94□□□□□ -0.66
SNCGO76070 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC10.94□□□□□ -0.66
SNCGO76070 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC10.94□□□□□ -0.66
SNCGO76070 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
SNCGO76070 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SNCGO76070 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SNCGO76070 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
SNCGO76070 ZFC3H1-201ENST00000378743 7285 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SNCGO76070 AC006254.1-201ENST00000468472 5640 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
SNCGO76070 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC10.94□□□□□ -0.66
SNCGO76070 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SNCGO76070 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SNCGO76070 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SNCGO76070 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SNCGO76070 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
SNCGO76070 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
SNCGO76070 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SNCGO76070 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SNCGO76070 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
SNCGO76070 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SNCGO76070 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC10.94□□□□□ -0.66
SNCGO76070 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC10.94□□□□□ -0.66
SNCGO76070 PPP1R14BP2-201ENST00000426284 444 ntBASIC10.94□□□□□ -0.66
SNCGO76070 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC10.94□□□□□ -0.66
SNCGO76070 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
SNCGO76070 AC002558.1-201ENST00000488906 803 ntBASIC10.94□□□□□ -0.66
SNCGO76070 IGHV3-52-201ENST00000519770 353 ntBASIC10.94□□□□□ -0.66
SNCGO76070 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC10.94□□□□□ -0.66
SNCGO76070 REEP1-209ENST00000541910 969 ntTSL 2 BASIC10.94□□□□□ -0.66
SNCGO76070 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
SNCGO76070 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
SNCGO76070 HLCS-202ENST00000399120 6466 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SNCGO76070 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SNCGO76070 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC10.94□□□□□ -0.66
SNCGO76070 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
SNCGO76070 SPICE1-201ENST00000295872 5417 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SNCGO76070 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC10.94□□□□□ -0.66
SNCGO76070 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SNCGO76070 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
SNCGO76070 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SNCGO76070 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
SNCGO76070 MAP1A-201ENST00000300231 10258 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
SNCGO76070 MTHFR-202ENST00000376583 7044 ntAPPRIS ALT1 TSL 5 BASIC10.94□□□□□ -0.66
SNCGO76070 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
SNCGO76070 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SNCGO76070 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC10.94□□□□□ -0.66
SNCGO76070 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SNCGO76070 SEMA6A-202ENST00000343348 6878 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms