RNA–Protein interactions for RNA: ENST00000343348.10

SEMA6A-202, Transcript of semaphorin 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA6A, Length 6,878 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-202ENST00000343348 DCAF8L2P0C7V8 631 aa20.79■□□□□ 0.92
SEMA6A-202ENST00000343348 SUPT5HO00267 1087 aaKnown RBP19.86■□□□□ 0.77
SEMA6A-202ENST00000343348 EHMT2Q96KQ7 1210 aa19.79■□□□□ 0.76
SEMA6A-202ENST00000343348 PELP1Q8IZL8 1130 aaKnown RBP19.51■□□□□ 0.71
SEMA6A-202ENST00000343348 SHROOM4Q9ULL8 1493 aa19.38■□□□□ 0.69
SEMA6A-202ENST00000343348 TTBK1Q5TCY1 1321 aaPredicted RBP19.13■□□□□ 0.65
SEMA6A-202ENST00000343348 ERICH6Q7L0X2 663 aa19.01■□□□□ 0.63
SEMA6A-202ENST00000343348 APLP2Q06481 763 aa18.95■□□□□ 0.62
SEMA6A-202ENST00000343348 PCGF6Q9BYE7 350 aa18.93■□□□□ 0.62
SEMA6A-202ENST00000343348 FAM9AQ8IZU1 332 aaPredicted RBP18.9■□□□□ 0.62
SEMA6A-202ENST00000343348 CENPBP07199 599 aaPredicted RBP18.71■□□□□ 0.59
SEMA6A-202ENST00000343348 RANGAP1P46060 587 aaPredicted RBP18.7■□□□□ 0.58
SEMA6A-202ENST00000343348 CCER1Q8TC90 406 aaPredicted RBP18.65■□□□□ 0.58
SEMA6A-202ENST00000343348 YTHDC1Q96MU7 727 aaKnown RBP18.61■□□□□ 0.57
SEMA6A-202ENST00000343348 MYT1Q01538 1121 aa18.48■□□□□ 0.55
SEMA6A-202ENST00000343348 ATP1B4Q9UN42 357 aaPredicted RBP18.47■□□□□ 0.55
SEMA6A-202ENST00000343348 NISCHQ9Y2I1 1504 aa18.42■□□□□ 0.54
SEMA6A-202ENST00000343348 NEFLP07196 543 aa18.37■□□□□ 0.53
SEMA6A-202ENST00000343348 ZEB1P37275 1124 aaPredicted RBP18.35■□□□□ 0.53
SEMA6A-202ENST00000343348 PPARGC1BQ86YN6 1023 aaKnown RBP18.27■□□□□ 0.52
SEMA6A-202ENST00000343348 TRIM41Q8WV44 630 aa18.17■□□□□ 0.5
SEMA6A-202ENST00000343348 UBTFP17480 764 aaKnown RBP18.13■□□□□ 0.49
SEMA6A-202ENST00000343348 DAXXQ9UER7 740 aaPredicted RBP18.02■□□□□ 0.47
SEMA6A-202ENST00000343348 CNGB1Q14028 1251 aaPredicted RBP17.98■□□□□ 0.47
SEMA6A-202ENST00000343348 POLR3GLQ9BT43 218 aa17.98■□□□□ 0.47
SEMA6A-202ENST00000343348 ITGAEP38570 1179 aa17.87■□□□□ 0.45
SEMA6A-202ENST00000343348 HRCP23327 699 aa17.82■□□□□ 0.44
SEMA6A-202ENST00000343348 TRIM26Q12899 539 aaPredicted RBP17.76■□□□□ 0.43
SEMA6A-202ENST00000343348 MYT1LQ9UL68 1186 aa17.69■□□□□ 0.42
SEMA6A-202ENST00000343348 HNRNPUL2Q1KMD3 747 aaKnown RBP17.65■□□□□ 0.42
SEMA6A-202ENST00000343348 CHIC1Q5VXU3 224 aa17.65■□□□□ 0.42
SEMA6A-202ENST00000343348 ZNF316A6NFI3 1004 aaPredicted RBP17.61■□□□□ 0.41
SEMA6A-202ENST00000343348 RTL5Q5HYW3 569 aaPredicted RBP17.61■□□□□ 0.41
SEMA6A-202ENST00000343348 LOC105371045A0A1W2PR82 267 aa17.6■□□□□ 0.41
SEMA6A-202ENST00000343348 SLC4A1APQ9BWU0 796 aaKnown RBP17.59■□□□□ 0.41
SEMA6A-202ENST00000343348 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.58■□□□□ 0.41
SEMA6A-202ENST00000343348 CLSPNQ9HAW4 1339 aa17.57■□□□□ 0.4
SEMA6A-202ENST00000343348 BCANQ96GW7 911 aa17.51■□□□□ 0.39
SEMA6A-202ENST00000343348 DIEXFQ68CQ4 756 aaKnown RBP17.46■□□□□ 0.39
SEMA6A-202ENST00000343348 GTF3C3Q9Y5Q9 886 aa17.33■□□□□ 0.37
SEMA6A-202ENST00000343348 BCL11AQ9H165 835 aa17.31■□□□□ 0.36
SEMA6A-202ENST00000343348 NEUROD1Q13562 356 aa17.25■□□□□ 0.35
SEMA6A-202ENST00000343348 FAM50AQ14320 339 aaKnown RBP17.2■□□□□ 0.34
SEMA6A-202ENST00000343348 CDK11AQ9UQ88 783 aaPredicted RBP17.17■□□□□ 0.34
SEMA6A-202ENST00000343348 TRIM52Q96A61 297 aa17.15■□□□□ 0.34
SEMA6A-202ENST00000343348 ZNF326Q5BKZ1 582 aaKnown RBP17.1■□□□□ 0.33
SEMA6A-202ENST00000343348 SLC24A1O60721 1099 aa17.07■□□□□ 0.32
SEMA6A-202ENST00000343348 ANP32CO43423 234 aa17.04■□□□□ 0.32
SEMA6A-202ENST00000343348 ZBTB47Q9UFB7 747 aaPredicted RBP17.04■□□□□ 0.32
SEMA6A-202ENST00000343348 EIF5BO60841 1220 aaKnown RBP17.03■□□□□ 0.32
SEMA6A-202ENST00000343348 NPM2Q86SE8 214 aaKnown RBP17.03■□□□□ 0.32
SEMA6A-202ENST00000343348 CANXP27824 592 aaKnown RBP16.99■□□□□ 0.31
SEMA6A-202ENST00000343348 ANP32AP39687 249 aaKnown RBP16.9■□□□□ 0.3
SEMA6A-202ENST00000343348 ACIN1Q9UKV3 1341 aaKnown RBP16.86■□□□□ 0.29
SEMA6A-202ENST00000343348 FKBP8Q14318 412 aa16.78■□□□□ 0.28
SEMA6A-202ENST00000343348 ARXQ96QS3 562 aa16.77■□□□□ 0.28
SEMA6A-202ENST00000343348 NBR1Q14596 966 aa16.76■□□□□ 0.27
SEMA6A-202ENST00000343348 ARID3CA6NKF2 412 aa16.72■□□□□ 0.27
SEMA6A-202ENST00000343348 HSP90AA1P07900 732 aaKnown RBP16.7■□□□□ 0.26
SEMA6A-202ENST00000343348 ANP32BQ92688 251 aaKnown RBP16.69■□□□□ 0.26
SEMA6A-202ENST00000343348 SALL2Q9Y467 1007 aaPredicted RBP16.68■□□□□ 0.26
SEMA6A-202ENST00000343348 NEFMP07197 916 aa16.68■□□□□ 0.26
SEMA6A-202ENST00000343348 PLPPR3Q6T4P5 718 aa16.65■□□□□ 0.26
SEMA6A-202ENST00000343348 P3H3Q8IVL6 736 aa16.64■□□□□ 0.25
SEMA6A-202ENST00000343348 FBLN2P98095 1184 aa16.62■□□□□ 0.25
SEMA6A-202ENST00000343348 FAM9BQ8IZU0 186 aa16.6■□□□□ 0.25
SEMA6A-202ENST00000343348 HNRNPUQ00839 825 aaKnown RBP eCLIP16.58■□□□□ 0.24
SEMA6A-202ENST00000343348 GLIPR1L2Q4G1C9 344 aa16.56■□□□□ 0.24
SEMA6A-202ENST00000343348 ZNF777Q9ULD5 760 aaPredicted RBP16.53■□□□□ 0.24
SEMA6A-202ENST00000343348 IRX6P78412 446 aaPredicted RBP16.52■□□□□ 0.24
SEMA6A-202ENST00000343348 PABPN1Q86U42 306 aaKnown RBP eCLIP16.51■□□□□ 0.23
SEMA6A-202ENST00000343348 UPF2Q9HAU5 1272 aaKnown RBP16.51■□□□□ 0.23
SEMA6A-202ENST00000343348 DDX10Q13206 875 aaKnown RBP16.51■□□□□ 0.23
SEMA6A-202ENST00000343348 CCDC136Q96JN2 1154 aa16.46■□□□□ 0.22
SEMA6A-202ENST00000343348 CHGAP10645 457 aaKnown RBP16.42■□□□□ 0.22
SEMA6A-202ENST00000343348 SCAF1Q9H7N4 1312 aaKnown RBP16.39■□□□□ 0.21
SEMA6A-202ENST00000343348 TONSLQ96HA7 1378 aa16.36■□□□□ 0.21
SEMA6A-202ENST00000343348 HIRIP3Q9BW71 556 aaPredicted RBP16.35■□□□□ 0.21
SEMA6A-202ENST00000343348 TMC1Q8TDI8 760 aa16.33■□□□□ 0.21
SEMA6A-202ENST00000343348 SENP3-EIF4A1A0A087X0R7 540 aa16.32■□□□□ 0.2
SEMA6A-202ENST00000343348 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.29■□□□□ 0.2
SEMA6A-202ENST00000343348 STAG3Q9UJ98 1225 aa16.29■□□□□ 0.2
SEMA6A-202ENST00000343348 TPRNQ4KMQ1 711 aa16.28■□□□□ 0.2
SEMA6A-202ENST00000343348 SENP3Q9H4L4 574 aaPredicted RBP16.28■□□□□ 0.2
SEMA6A-202ENST00000343348 MIER1Q8N108 512 aa16.26■□□□□ 0.19
SEMA6A-202ENST00000343348 RTN4Q9NQC3 1192 aaKnown RBP16.25■□□□□ 0.19
SEMA6A-202ENST00000343348 PLEKHG5O94827 1062 aa16.25■□□□□ 0.19
SEMA6A-202ENST00000343348 WDR43Q15061 677 aaKnown RBP eCLIP16.25■□□□□ 0.19
SEMA6A-202ENST00000343348 MRS2Q9HD23 443 aa16.24■□□□□ 0.19
SEMA6A-202ENST00000343348 CHIC2Q9UKJ5 165 aa16.24■□□□□ 0.19
SEMA6A-202ENST00000343348 KDM2AQ9Y2K7 1162 aa16.24■□□□□ 0.19
SEMA6A-202ENST00000343348 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.24■□□□□ 0.19
SEMA6A-202ENST00000343348 TRIM44Q96DX7 344 aaPredicted RBP16.21■□□□□ 0.19
SEMA6A-202ENST00000343348 CSRNP3Q8WYN3 585 aa16.2■□□□□ 0.18
SEMA6A-202ENST00000343348 ESF1Q9H501 851 aaKnown RBP16.2■□□□□ 0.18
SEMA6A-202ENST00000343348 NCLP19338 710 aaKnown RBP16.19■□□□□ 0.18
SEMA6A-202ENST00000343348 A0A0G2JS52 829 aa16.18■□□□□ 0.18
SEMA6A-202ENST00000343348 ABCC9O60706 1549 aa16.18■□□□□ 0.18
SEMA6A-202ENST00000343348 CDK11BP21127 795 aaKnown RBP16.16■□□□□ 0.18
SEMA6A-202ENST00000343348 ZBTB7CA1YPR0 619 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms