Protein–RNA interactions for Protein: Q9Y5T5

USP16, Ubiquitin carboxyl-terminal hydrolase 16, humanhuman

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP16Q9Y5T5 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC30.44■■■□□ 2.46
USP16Q9Y5T5 ERN1-208ENST00000606895 2068 ntBASIC30.44■■■□□ 2.46
USP16Q9Y5T5 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
USP16Q9Y5T5 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
USP16Q9Y5T5 AC008406.3-201ENST00000620001 1374 ntBASIC30.43■■■□□ 2.46
USP16Q9Y5T5 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC30.43■■■□□ 2.46
USP16Q9Y5T5 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
USP16Q9Y5T5 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC30.42■■■□□ 2.46
USP16Q9Y5T5 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC30.42■■■□□ 2.46
USP16Q9Y5T5 SENP5-202ENST00000419026 973 ntTSL 3 BASIC30.42■■■□□ 2.46
USP16Q9Y5T5 LSM7-203ENST00000585409 512 ntTSL 2 BASIC30.42■■■□□ 2.46
USP16Q9Y5T5 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
USP16Q9Y5T5 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
USP16Q9Y5T5 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
USP16Q9Y5T5 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC30.41■■■□□ 2.46
USP16Q9Y5T5 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
USP16Q9Y5T5 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC30.41■■■□□ 2.46
USP16Q9Y5T5 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC30.41■■■□□ 2.46
USP16Q9Y5T5 AC011551.1-201ENST00000614101 683 ntBASIC30.41■■■□□ 2.46
USP16Q9Y5T5 AC096887.2-201ENST00000623443 1957 ntBASIC30.41■■■□□ 2.46
USP16Q9Y5T5 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
USP16Q9Y5T5 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC30.39■■■□□ 2.46
USP16Q9Y5T5 AC019069.1-201ENST00000610008 1333 ntBASIC30.39■■■□□ 2.46
USP16Q9Y5T5 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC30.38■■■□□ 2.45
USP16Q9Y5T5 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
USP16Q9Y5T5 FOXO3B-201ENST00000395675 1928 ntBASIC30.38■■■□□ 2.45
USP16Q9Y5T5 PEMT-206ENST00000435340 960 ntTSL 5 BASIC30.38■■■□□ 2.45
USP16Q9Y5T5 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC30.38■■■□□ 2.45
USP16Q9Y5T5 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
USP16Q9Y5T5 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
USP16Q9Y5T5 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC30.37■■■□□ 2.45
USP16Q9Y5T5 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
USP16Q9Y5T5 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC30.37■■■□□ 2.45
USP16Q9Y5T5 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
USP16Q9Y5T5 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC30.36■■■□□ 2.45
USP16Q9Y5T5 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
USP16Q9Y5T5 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
USP16Q9Y5T5 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
USP16Q9Y5T5 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC30.36■■■□□ 2.45
USP16Q9Y5T5 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
USP16Q9Y5T5 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
USP16Q9Y5T5 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
USP16Q9Y5T5 AF131216.4-201ENST00000638924 1588 ntBASIC30.34■■■□□ 2.45
USP16Q9Y5T5 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC30.34■■■□□ 2.45
USP16Q9Y5T5 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
USP16Q9Y5T5 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC30.34■■■□□ 2.45
USP16Q9Y5T5 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC30.33■■■□□ 2.45
USP16Q9Y5T5 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC30.33■■■□□ 2.45
USP16Q9Y5T5 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC30.33■■■□□ 2.45
USP16Q9Y5T5 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
USP16Q9Y5T5 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC30.33■■■□□ 2.45
USP16Q9Y5T5 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC30.32■■■□□ 2.45
USP16Q9Y5T5 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
USP16Q9Y5T5 TK2-202ENST00000417693 1046 ntTSL 2 BASIC30.32■■■□□ 2.44
USP16Q9Y5T5 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC30.32■■■□□ 2.44
USP16Q9Y5T5 SSSCA1-AS1-201ENST00000567594 614 ntBASIC30.32■■■□□ 2.44
USP16Q9Y5T5 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
USP16Q9Y5T5 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC30.32■■■□□ 2.44
USP16Q9Y5T5 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC30.31■■■□□ 2.44
USP16Q9Y5T5 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC30.31■■■□□ 2.44
USP16Q9Y5T5 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC30.31■■■□□ 2.44
USP16Q9Y5T5 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC30.31■■■□□ 2.44
USP16Q9Y5T5 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
USP16Q9Y5T5 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
USP16Q9Y5T5 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
USP16Q9Y5T5 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC30.3■■■□□ 2.44
USP16Q9Y5T5 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
USP16Q9Y5T5 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
USP16Q9Y5T5 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC30.3■■■□□ 2.44
USP16Q9Y5T5 AC010997.5-201ENST00000609182 354 ntBASIC30.3■■■□□ 2.44
USP16Q9Y5T5 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC30.3■■■□□ 2.44
USP16Q9Y5T5 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
USP16Q9Y5T5 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
USP16Q9Y5T5 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
USP16Q9Y5T5 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
USP16Q9Y5T5 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC30.29■■■□□ 2.44
USP16Q9Y5T5 LSM4-201ENST00000252816 986 ntTSL 2 BASIC30.29■■■□□ 2.44
USP16Q9Y5T5 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC30.29■■■□□ 2.44
USP16Q9Y5T5 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
USP16Q9Y5T5 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC30.29■■■□□ 2.44
USP16Q9Y5T5 TRIR-202ENST00000588213 841 ntTSL 3 BASIC30.29■■■□□ 2.44
USP16Q9Y5T5 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC30.29■■■□□ 2.44
USP16Q9Y5T5 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
USP16Q9Y5T5 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
USP16Q9Y5T5 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC30.28■■■□□ 2.44
USP16Q9Y5T5 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
USP16Q9Y5T5 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC30.28■■■□□ 2.44
USP16Q9Y5T5 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC30.28■■■□□ 2.44
USP16Q9Y5T5 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC30.27■■■□□ 2.44
USP16Q9Y5T5 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC30.27■■■□□ 2.44
USP16Q9Y5T5 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC30.27■■■□□ 2.44
USP16Q9Y5T5 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
USP16Q9Y5T5 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC30.27■■■□□ 2.44
USP16Q9Y5T5 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC30.27■■■□□ 2.44
USP16Q9Y5T5 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC30.26■■■□□ 2.44
USP16Q9Y5T5 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC30.26■■■□□ 2.44
USP16Q9Y5T5 AC131281.2-201ENST00000520478 145 ntBASIC30.26■■■□□ 2.43
USP16Q9Y5T5 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC30.26■■■□□ 2.43
USP16Q9Y5T5 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
USP16Q9Y5T5 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC30.26■■■□□ 2.43
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms