Protein–RNA interactions for Protein: Q9Y5H1

PCDHGA2, Protocadherin gamma-A2, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA2Q9Y5H1 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC24■■□□□ 1.43
PCDHGA2Q9Y5H1 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PCDHGA2Q9Y5H1 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
PCDHGA2Q9Y5H1 AC135279.3-201ENST00000610945 1311 ntBASIC24■■□□□ 1.43
PCDHGA2Q9Y5H1 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC24■■□□□ 1.43
PCDHGA2Q9Y5H1 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
PCDHGA2Q9Y5H1 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
PCDHGA2Q9Y5H1 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
PCDHGA2Q9Y5H1 TK2-202ENST00000417693 1046 ntTSL 2 BASIC23.99■■□□□ 1.43
PCDHGA2Q9Y5H1 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC23.99■■□□□ 1.43
PCDHGA2Q9Y5H1 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
PCDHGA2Q9Y5H1 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
PCDHGA2Q9Y5H1 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
PCDHGA2Q9Y5H1 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
PCDHGA2Q9Y5H1 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
PCDHGA2Q9Y5H1 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.98■■□□□ 1.43
PCDHGA2Q9Y5H1 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC23.97■■□□□ 1.43
PCDHGA2Q9Y5H1 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PCDHGA2Q9Y5H1 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PCDHGA2Q9Y5H1 SENP5-202ENST00000419026 973 ntTSL 3 BASIC23.97■■□□□ 1.43
PCDHGA2Q9Y5H1 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
PCDHGA2Q9Y5H1 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC23.97■■□□□ 1.43
PCDHGA2Q9Y5H1 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC23.97■■□□□ 1.43
PCDHGA2Q9Y5H1 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHGA2Q9Y5H1 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC23.96■■□□□ 1.43
PCDHGA2Q9Y5H1 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHGA2Q9Y5H1 LGR4-203ENST00000480977 492 ntTSL 2 BASIC23.96■■□□□ 1.43
PCDHGA2Q9Y5H1 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC23.96■■□□□ 1.43
PCDHGA2Q9Y5H1 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC23.96■■□□□ 1.43
PCDHGA2Q9Y5H1 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC23.96■■□□□ 1.43
PCDHGA2Q9Y5H1 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
PCDHGA2Q9Y5H1 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC23.95■■□□□ 1.42
PCDHGA2Q9Y5H1 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PCDHGA2Q9Y5H1 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC23.95■■□□□ 1.42
PCDHGA2Q9Y5H1 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC23.95■■□□□ 1.42
PCDHGA2Q9Y5H1 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC23.95■■□□□ 1.42
PCDHGA2Q9Y5H1 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
PCDHGA2Q9Y5H1 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
PCDHGA2Q9Y5H1 SHF-208ENST00000560734 1731 ntTSL 3 BASIC23.95■■□□□ 1.42
PCDHGA2Q9Y5H1 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
PCDHGA2Q9Y5H1 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
PCDHGA2Q9Y5H1 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PCDHGA2Q9Y5H1 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
PCDHGA2Q9Y5H1 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PCDHGA2Q9Y5H1 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC23.94■■□□□ 1.42
PCDHGA2Q9Y5H1 AC011551.1-201ENST00000614101 683 ntBASIC23.94■■□□□ 1.42
PCDHGA2Q9Y5H1 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC23.94■■□□□ 1.42
PCDHGA2Q9Y5H1 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC23.94■■□□□ 1.42
PCDHGA2Q9Y5H1 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PCDHGA2Q9Y5H1 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PCDHGA2Q9Y5H1 AL121749.1-202ENST00000609313 2153 ntBASIC23.93■■□□□ 1.42
PCDHGA2Q9Y5H1 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC23.93■■□□□ 1.42
PCDHGA2Q9Y5H1 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
PCDHGA2Q9Y5H1 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC23.93■■□□□ 1.42
PCDHGA2Q9Y5H1 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
PCDHGA2Q9Y5H1 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
PCDHGA2Q9Y5H1 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PCDHGA2Q9Y5H1 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
PCDHGA2Q9Y5H1 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
PCDHGA2Q9Y5H1 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
PCDHGA2Q9Y5H1 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
PCDHGA2Q9Y5H1 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PCDHGA2Q9Y5H1 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
PCDHGA2Q9Y5H1 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC23.91■■□□□ 1.42
PCDHGA2Q9Y5H1 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC23.91■■□□□ 1.42
PCDHGA2Q9Y5H1 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PCDHGA2Q9Y5H1 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
PCDHGA2Q9Y5H1 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC23.91■■□□□ 1.42
PCDHGA2Q9Y5H1 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC23.91■■□□□ 1.42
PCDHGA2Q9Y5H1 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHGA2Q9Y5H1 SUDS3P1-201ENST00000505831 966 ntBASIC23.9■■□□□ 1.42
PCDHGA2Q9Y5H1 RASSF1-AS1-201ENST00000629828 790 ntBASIC23.9■■□□□ 1.42
PCDHGA2Q9Y5H1 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHGA2Q9Y5H1 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHGA2Q9Y5H1 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
PCDHGA2Q9Y5H1 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
PCDHGA2Q9Y5H1 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.42
PCDHGA2Q9Y5H1 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
PCDHGA2Q9Y5H1 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC23.89■■□□□ 1.41
PCDHGA2Q9Y5H1 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC23.89■■□□□ 1.41
PCDHGA2Q9Y5H1 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC23.89■■□□□ 1.41
PCDHGA2Q9Y5H1 GAK-223ENST00000628912 497 ntTSL 5 BASIC23.89■■□□□ 1.41
PCDHGA2Q9Y5H1 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
PCDHGA2Q9Y5H1 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHGA2Q9Y5H1 CD72-202ENST00000378430 585 ntTSL 3 BASIC23.88■■□□□ 1.41
PCDHGA2Q9Y5H1 AL031432.3-201ENST00000607698 485 ntBASIC23.88■■□□□ 1.41
PCDHGA2Q9Y5H1 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHGA2Q9Y5H1 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
PCDHGA2Q9Y5H1 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCDHGA2Q9Y5H1 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
PCDHGA2Q9Y5H1 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC23.87■■□□□ 1.41
PCDHGA2Q9Y5H1 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCDHGA2Q9Y5H1 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC23.87■■□□□ 1.41
PCDHGA2Q9Y5H1 CLTA-210ENST00000540080 989 ntTSL 2 BASIC23.87■■□□□ 1.41
PCDHGA2Q9Y5H1 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PCDHGA2Q9Y5H1 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCDHGA2Q9Y5H1 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
PCDHGA2Q9Y5H1 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC23.87■■□□□ 1.41
PCDHGA2Q9Y5H1 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.87■■□□□ 1.41
PCDHGA2Q9Y5H1 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC23.87■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms