Protein–RNA interactions for Protein: Q9Y577

TRIM17, E3 ubiquitin-protein ligase TRIM17, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM17Q9Y577 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC27.17■■□□□ 1.94
TRIM17Q9Y577 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
TRIM17Q9Y577 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC27.16■■□□□ 1.94
TRIM17Q9Y577 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC27.16■■□□□ 1.94
TRIM17Q9Y577 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC27.16■■□□□ 1.94
TRIM17Q9Y577 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC27.16■■□□□ 1.94
TRIM17Q9Y577 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
TRIM17Q9Y577 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
TRIM17Q9Y577 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC27.15■■□□□ 1.94
TRIM17Q9Y577 AF131216.4-201ENST00000638924 1588 ntBASIC27.15■■□□□ 1.94
TRIM17Q9Y577 MIR939-201ENST00000401314 82 ntBASIC27.15■■□□□ 1.94
TRIM17Q9Y577 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC27.15■■□□□ 1.94
TRIM17Q9Y577 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
TRIM17Q9Y577 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
TRIM17Q9Y577 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
TRIM17Q9Y577 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC27.14■■□□□ 1.94
TRIM17Q9Y577 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC27.14■■□□□ 1.94
TRIM17Q9Y577 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
TRIM17Q9Y577 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
TRIM17Q9Y577 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC27.13■■□□□ 1.93
TRIM17Q9Y577 CLTA-206ENST00000466396 695 ntTSL 2 BASIC27.13■■□□□ 1.93
TRIM17Q9Y577 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC27.13■■□□□ 1.93
TRIM17Q9Y577 AC090192.1-201ENST00000517740 490 ntBASIC27.13■■□□□ 1.93
TRIM17Q9Y577 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC27.13■■□□□ 1.93
TRIM17Q9Y577 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
TRIM17Q9Y577 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC27.12■■□□□ 1.93
TRIM17Q9Y577 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
TRIM17Q9Y577 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC27.12■■□□□ 1.93
TRIM17Q9Y577 AL449106.1-201ENST00000608517 1980 ntBASIC27.11■■□□□ 1.93
TRIM17Q9Y577 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
TRIM17Q9Y577 AP001330.3-201ENST00000520123 633 ntBASIC27.11■■□□□ 1.93
TRIM17Q9Y577 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC27.11■■□□□ 1.93
TRIM17Q9Y577 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC27.11■■□□□ 1.93
TRIM17Q9Y577 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC27.11■■□□□ 1.93
TRIM17Q9Y577 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC27.1■■□□□ 1.93
TRIM17Q9Y577 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC27.1■■□□□ 1.93
TRIM17Q9Y577 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC27.1■■□□□ 1.93
TRIM17Q9Y577 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
TRIM17Q9Y577 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
TRIM17Q9Y577 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
TRIM17Q9Y577 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC27.09■■□□□ 1.93
TRIM17Q9Y577 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
TRIM17Q9Y577 RARRES2P11-201ENST00000635158 484 ntBASIC27.09■■□□□ 1.93
TRIM17Q9Y577 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC27.08■■□□□ 1.93
TRIM17Q9Y577 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
TRIM17Q9Y577 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
TRIM17Q9Y577 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC27.08■■□□□ 1.93
TRIM17Q9Y577 AC091305.1-201ENST00000479476 895 ntBASIC27.08■■□□□ 1.93
TRIM17Q9Y577 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC27.08■■□□□ 1.93
TRIM17Q9Y577 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC27.08■■□□□ 1.93
TRIM17Q9Y577 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC27.07■■□□□ 1.92
TRIM17Q9Y577 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
TRIM17Q9Y577 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
TRIM17Q9Y577 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC27.06■■□□□ 1.92
TRIM17Q9Y577 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
TRIM17Q9Y577 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
TRIM17Q9Y577 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
TRIM17Q9Y577 MIR6722-201ENST00000617286 78 ntBASIC27.05■■□□□ 1.92
TRIM17Q9Y577 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC27.05■■□□□ 1.92
TRIM17Q9Y577 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC27.04■■□□□ 1.92
TRIM17Q9Y577 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC27.04■■□□□ 1.92
TRIM17Q9Y577 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
TRIM17Q9Y577 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC27.04■■□□□ 1.92
TRIM17Q9Y577 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
TRIM17Q9Y577 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC27.04■■□□□ 1.92
TRIM17Q9Y577 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
TRIM17Q9Y577 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC27.04■■□□□ 1.92
TRIM17Q9Y577 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
TRIM17Q9Y577 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
TRIM17Q9Y577 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC27.03■■□□□ 1.92
TRIM17Q9Y577 BX255925.1-201ENST00000566954 1854 ntBASIC27.03■■□□□ 1.92
TRIM17Q9Y577 AC004448.1-201ENST00000458332 883 ntBASIC27.02■■□□□ 1.92
TRIM17Q9Y577 SNX5-217ENST00000606557 1087 ntBASIC27.02■■□□□ 1.92
TRIM17Q9Y577 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC27.01■■□□□ 1.91
TRIM17Q9Y577 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
TRIM17Q9Y577 GATM-206ENST00000558336 1522 ntTSL 2 BASIC27■■□□□ 1.91
TRIM17Q9Y577 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
TRIM17Q9Y577 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
TRIM17Q9Y577 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC27■■□□□ 1.91
TRIM17Q9Y577 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
TRIM17Q9Y577 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC26.99■■□□□ 1.91
TRIM17Q9Y577 SSSCA1-AS1-201ENST00000567594 614 ntBASIC26.99■■□□□ 1.91
TRIM17Q9Y577 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC26.99■■□□□ 1.91
TRIM17Q9Y577 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC26.99■■□□□ 1.91
TRIM17Q9Y577 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC26.99■■□□□ 1.91
TRIM17Q9Y577 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
TRIM17Q9Y577 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
TRIM17Q9Y577 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC26.98■■□□□ 1.91
TRIM17Q9Y577 DUX4L19-201ENST00000557448 1267 ntBASIC26.98■■□□□ 1.91
TRIM17Q9Y577 MAG-206ENST00000597035 542 ntTSL 4 BASIC26.98■■□□□ 1.91
TRIM17Q9Y577 CA15P2-201ENST00000611168 834 ntBASIC26.98■■□□□ 1.91
TRIM17Q9Y577 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC26.98■■□□□ 1.91
TRIM17Q9Y577 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC26.98■■□□□ 1.91
TRIM17Q9Y577 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
TRIM17Q9Y577 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC26.97■■□□□ 1.91
TRIM17Q9Y577 PROC-203ENST00000409048 1586 ntTSL 5 BASIC26.97■■□□□ 1.91
TRIM17Q9Y577 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC26.97■■□□□ 1.91
TRIM17Q9Y577 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC26.97■■□□□ 1.91
TRIM17Q9Y577 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC26.97■■□□□ 1.91
TRIM17Q9Y577 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms