Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC22.69■■□□□ 1.22
PCDHGB4Q9UN71 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC22.69■■□□□ 1.22
PCDHGB4Q9UN71 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
PCDHGB4Q9UN71 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
PCDHGB4Q9UN71 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
PCDHGB4Q9UN71 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
PCDHGB4Q9UN71 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
PCDHGB4Q9UN71 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
PCDHGB4Q9UN71 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC22.68■■□□□ 1.22
PCDHGB4Q9UN71 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHGB4Q9UN71 CLDN5-201ENST00000403084 2357 ntBASIC22.68■■□□□ 1.22
PCDHGB4Q9UN71 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHGB4Q9UN71 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC22.68■■□□□ 1.22
PCDHGB4Q9UN71 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHGB4Q9UN71 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHGB4Q9UN71 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHGB4Q9UN71 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHGB4Q9UN71 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHGB4Q9UN71 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC22.67■■□□□ 1.22
PCDHGB4Q9UN71 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHGB4Q9UN71 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHGB4Q9UN71 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHGB4Q9UN71 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHGB4Q9UN71 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC22.66■■□□□ 1.22
PCDHGB4Q9UN71 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHGB4Q9UN71 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHGB4Q9UN71 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC22.66■■□□□ 1.22
PCDHGB4Q9UN71 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHGB4Q9UN71 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC22.66■■□□□ 1.22
PCDHGB4Q9UN71 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
PCDHGB4Q9UN71 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC22.66■■□□□ 1.22
PCDHGB4Q9UN71 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHGB4Q9UN71 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHGB4Q9UN71 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC22.65■■□□□ 1.22
PCDHGB4Q9UN71 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHGB4Q9UN71 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHGB4Q9UN71 TPT1-202ENST00000379055 948 ntTSL 2 BASIC22.65■■□□□ 1.22
PCDHGB4Q9UN71 PFN2-211ENST00000489155 636 ntTSL 4 BASIC22.65■■□□□ 1.22
PCDHGB4Q9UN71 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
PCDHGB4Q9UN71 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHGB4Q9UN71 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHGB4Q9UN71 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC22.65■■□□□ 1.22
PCDHGB4Q9UN71 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.22
PCDHGB4Q9UN71 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC22.64■■□□□ 1.22
PCDHGB4Q9UN71 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC22.64■■□□□ 1.21
PCDHGB4Q9UN71 PVT1-219ENST00000523427 938 ntTSL 3 BASIC22.64■■□□□ 1.21
PCDHGB4Q9UN71 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
PCDHGB4Q9UN71 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
PCDHGB4Q9UN71 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PCDHGB4Q9UN71 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHGB4Q9UN71 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC22.63■■□□□ 1.21
PCDHGB4Q9UN71 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHGB4Q9UN71 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHGB4Q9UN71 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC22.63■■□□□ 1.21
PCDHGB4Q9UN71 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHGB4Q9UN71 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC22.62■■□□□ 1.21
PCDHGB4Q9UN71 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHGB4Q9UN71 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHGB4Q9UN71 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHGB4Q9UN71 MIR639-201ENST00000384974 98 ntBASIC22.62■■□□□ 1.21
PCDHGB4Q9UN71 AC060814.1-201ENST00000554326 538 ntBASIC22.62■■□□□ 1.21
PCDHGB4Q9UN71 MIR3960-201ENST00000583311 91 ntBASIC22.62■■□□□ 1.21
PCDHGB4Q9UN71 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
PCDHGB4Q9UN71 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHGB4Q9UN71 AC097639.1-201ENST00000565519 1891 ntBASIC22.62■■□□□ 1.21
PCDHGB4Q9UN71 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC22.61■■□□□ 1.21
PCDHGB4Q9UN71 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
PCDHGB4Q9UN71 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHGB4Q9UN71 AC079834.2-201ENST00000609776 1949 ntBASIC22.61■■□□□ 1.21
PCDHGB4Q9UN71 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHGB4Q9UN71 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHGB4Q9UN71 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
PCDHGB4Q9UN71 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHGB4Q9UN71 SMPD5-203ENST00000639008 1464 ntBASIC22.6■■□□□ 1.21
PCDHGB4Q9UN71 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHGB4Q9UN71 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC22.6■■□□□ 1.21
PCDHGB4Q9UN71 AL157400.5-201ENST00000507624 621 ntBASIC22.6■■□□□ 1.21
PCDHGB4Q9UN71 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC22.6■■□□□ 1.21
PCDHGB4Q9UN71 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHGB4Q9UN71 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
PCDHGB4Q9UN71 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHGB4Q9UN71 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC22.6■■□□□ 1.21
PCDHGB4Q9UN71 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
PCDHGB4Q9UN71 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHGB4Q9UN71 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHGB4Q9UN71 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHGB4Q9UN71 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHGB4Q9UN71 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHGB4Q9UN71 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC22.59■■□□□ 1.21
PCDHGB4Q9UN71 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHGB4Q9UN71 AC025884.2-201ENST00000553429 711 ntBASIC22.59■■□□□ 1.21
PCDHGB4Q9UN71 MOB2-207ENST00000614710 705 ntTSL 5 BASIC22.59■■□□□ 1.21
PCDHGB4Q9UN71 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC22.59■■□□□ 1.21
PCDHGB4Q9UN71 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHGB4Q9UN71 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHGB4Q9UN71 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHGB4Q9UN71 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC22.58■■□□□ 1.2
PCDHGB4Q9UN71 REST-210ENST00000638187 1334 ntTSL 5 BASIC22.57■■□□□ 1.2
PCDHGB4Q9UN71 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
PCDHGB4Q9UN71 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms