Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NOTCH3Q9UM47 AL356740.2-201ENST00000601559 647 ntBASIC18.11■□□□□ 0.49
NOTCH3Q9UM47 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NOTCH3Q9UM47 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
NOTCH3Q9UM47 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.1■□□□□ 0.49
NOTCH3Q9UM47 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NOTCH3Q9UM47 SENP5-202ENST00000419026 973 ntTSL 3 BASIC18.1■□□□□ 0.49
NOTCH3Q9UM47 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NOTCH3Q9UM47 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
NOTCH3Q9UM47 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC18.1■□□□□ 0.49
NOTCH3Q9UM47 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
NOTCH3Q9UM47 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC18.1■□□□□ 0.49
NOTCH3Q9UM47 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
NOTCH3Q9UM47 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.09■□□□□ 0.49
NOTCH3Q9UM47 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
NOTCH3Q9UM47 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
NOTCH3Q9UM47 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC18.09■□□□□ 0.49
NOTCH3Q9UM47 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NOTCH3Q9UM47 SNAI3-AS1-204ENST00000567997 2048 ntBASIC18.09■□□□□ 0.49
NOTCH3Q9UM47 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC18.09■□□□□ 0.49
NOTCH3Q9UM47 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
NOTCH3Q9UM47 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NOTCH3Q9UM47 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
NOTCH3Q9UM47 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NOTCH3Q9UM47 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
NOTCH3Q9UM47 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
NOTCH3Q9UM47 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NOTCH3Q9UM47 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC18.09■□□□□ 0.49
NOTCH3Q9UM47 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
NOTCH3Q9UM47 AL136116.3-201ENST00000402907 1138 ntBASIC18.08■□□□□ 0.48
NOTCH3Q9UM47 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
NOTCH3Q9UM47 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NOTCH3Q9UM47 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
NOTCH3Q9UM47 PKM-203ENST00000389093 2279 ntTSL 5 BASIC18.08■□□□□ 0.48
NOTCH3Q9UM47 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NOTCH3Q9UM47 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NOTCH3Q9UM47 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.07■□□□□ 0.48
NOTCH3Q9UM47 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NOTCH3Q9UM47 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NOTCH3Q9UM47 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NOTCH3Q9UM47 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NOTCH3Q9UM47 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NOTCH3Q9UM47 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC18.07■□□□□ 0.48
NOTCH3Q9UM47 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NOTCH3Q9UM47 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
NOTCH3Q9UM47 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
NOTCH3Q9UM47 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.06■□□□□ 0.48
NOTCH3Q9UM47 SUDS3P1-201ENST00000505831 966 ntBASIC18.06■□□□□ 0.48
NOTCH3Q9UM47 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.06■□□□□ 0.48
NOTCH3Q9UM47 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.06■□□□□ 0.48
NOTCH3Q9UM47 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC18.06■□□□□ 0.48
NOTCH3Q9UM47 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
NOTCH3Q9UM47 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NOTCH3Q9UM47 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.06■□□□□ 0.48
NOTCH3Q9UM47 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC18.06■□□□□ 0.48
NOTCH3Q9UM47 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
NOTCH3Q9UM47 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NOTCH3Q9UM47 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NOTCH3Q9UM47 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NOTCH3Q9UM47 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NOTCH3Q9UM47 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NOTCH3Q9UM47 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
NOTCH3Q9UM47 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NOTCH3Q9UM47 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
NOTCH3Q9UM47 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.04■□□□□ 0.48
NOTCH3Q9UM47 AIRN-201ENST00000601203 4374 ntBASIC18.04■□□□□ 0.48
NOTCH3Q9UM47 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC18.04■□□□□ 0.48
NOTCH3Q9UM47 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NOTCH3Q9UM47 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC18.04■□□□□ 0.48
NOTCH3Q9UM47 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC18.04■□□□□ 0.48
NOTCH3Q9UM47 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NOTCH3Q9UM47 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NOTCH3Q9UM47 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC18.04■□□□□ 0.48
NOTCH3Q9UM47 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC18.04■□□□□ 0.48
NOTCH3Q9UM47 AC010997.5-201ENST00000609182 354 ntBASIC18.04■□□□□ 0.48
NOTCH3Q9UM47 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
NOTCH3Q9UM47 AL117332.1-201ENST00000622628 974 ntBASIC18.04■□□□□ 0.48
NOTCH3Q9UM47 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NOTCH3Q9UM47 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NOTCH3Q9UM47 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC18.03■□□□□ 0.48
NOTCH3Q9UM47 ZNRF2P3-201ENST00000424200 374 ntBASIC18.03■□□□□ 0.48
NOTCH3Q9UM47 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.03■□□□□ 0.48
NOTCH3Q9UM47 AC096631.2-201ENST00000436136 790 ntBASIC18.03■□□□□ 0.48
NOTCH3Q9UM47 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.03■□□□□ 0.48
NOTCH3Q9UM47 AC133561.4-201ENST00000566112 224 ntBASIC18.03■□□□□ 0.48
NOTCH3Q9UM47 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NOTCH3Q9UM47 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NOTCH3Q9UM47 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
NOTCH3Q9UM47 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC18.03■□□□□ 0.48
NOTCH3Q9UM47 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NOTCH3Q9UM47 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NOTCH3Q9UM47 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NOTCH3Q9UM47 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC18.02■□□□□ 0.48
NOTCH3Q9UM47 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC18.02■□□□□ 0.48
NOTCH3Q9UM47 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NOTCH3Q9UM47 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NOTCH3Q9UM47 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NOTCH3Q9UM47 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC18.01■□□□□ 0.47
NOTCH3Q9UM47 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NOTCH3Q9UM47 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms