Protein–RNA interactions for Protein: Q9UK58

CCNL1, Cyclin-L1, humanhuman

Predicted RBP Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1Q9UK58 SUDS3P1-201ENST00000505831 966 ntBASIC30.6■■■□□ 2.49
CCNL1Q9UK58 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC30.6■■■□□ 2.49
CCNL1Q9UK58 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC30.6■■■□□ 2.49
CCNL1Q9UK58 AC104564.3-201ENST00000582367 638 ntBASIC30.59■■■□□ 2.49
CCNL1Q9UK58 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
CCNL1Q9UK58 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC30.59■■■□□ 2.49
CCNL1Q9UK58 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC30.59■■■□□ 2.49
CCNL1Q9UK58 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC30.58■■■□□ 2.49
CCNL1Q9UK58 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
CCNL1Q9UK58 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC30.58■■■□□ 2.49
CCNL1Q9UK58 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.49
CCNL1Q9UK58 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
CCNL1Q9UK58 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC30.57■■■□□ 2.48
CCNL1Q9UK58 AL136162.1-201ENST00000607711 1078 ntBASIC30.56■■■□□ 2.48
CCNL1Q9UK58 MIR5787-201ENST00000611784 55 ntBASIC30.56■■■□□ 2.48
CCNL1Q9UK58 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
CCNL1Q9UK58 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC30.56■■■□□ 2.48
CCNL1Q9UK58 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC30.56■■■□□ 2.48
CCNL1Q9UK58 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
CCNL1Q9UK58 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC30.56■■■□□ 2.48
CCNL1Q9UK58 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC30.55■■■□□ 2.48
CCNL1Q9UK58 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC30.55■■■□□ 2.48
CCNL1Q9UK58 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC30.55■■■□□ 2.48
CCNL1Q9UK58 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC30.55■■■□□ 2.48
CCNL1Q9UK58 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
CCNL1Q9UK58 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC30.55■■■□□ 2.48
CCNL1Q9UK58 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
CCNL1Q9UK58 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
CCNL1Q9UK58 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC30.54■■■□□ 2.48
CCNL1Q9UK58 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
CCNL1Q9UK58 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
CCNL1Q9UK58 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC30.53■■■□□ 2.48
CCNL1Q9UK58 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC30.53■■■□□ 2.48
CCNL1Q9UK58 SSSCA1-AS1-201ENST00000567594 614 ntBASIC30.53■■■□□ 2.48
CCNL1Q9UK58 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC30.53■■■□□ 2.48
CCNL1Q9UK58 CLTA-206ENST00000466396 695 ntTSL 2 BASIC30.52■■■□□ 2.48
CCNL1Q9UK58 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
CCNL1Q9UK58 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
CCNL1Q9UK58 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC30.52■■■□□ 2.48
CCNL1Q9UK58 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC30.51■■■□□ 2.47
CCNL1Q9UK58 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC30.51■■■□□ 2.47
CCNL1Q9UK58 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC30.51■■■□□ 2.47
CCNL1Q9UK58 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
CCNL1Q9UK58 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
CCNL1Q9UK58 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC30.49■■■□□ 2.47
CCNL1Q9UK58 SNAI3-AS1-204ENST00000567997 2048 ntBASIC30.49■■■□□ 2.47
CCNL1Q9UK58 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
CCNL1Q9UK58 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
CCNL1Q9UK58 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC30.49■■■□□ 2.47
CCNL1Q9UK58 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC30.48■■■□□ 2.47
CCNL1Q9UK58 HYI-206ENST00000372434 1025 ntTSL 5 BASIC30.48■■■□□ 2.47
CCNL1Q9UK58 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC30.48■■■□□ 2.47
CCNL1Q9UK58 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC30.48■■■□□ 2.47
CCNL1Q9UK58 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC30.48■■■□□ 2.47
CCNL1Q9UK58 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
CCNL1Q9UK58 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC30.47■■■□□ 2.47
CCNL1Q9UK58 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC30.47■■■□□ 2.47
CCNL1Q9UK58 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
CCNL1Q9UK58 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
CCNL1Q9UK58 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC30.47■■■□□ 2.47
CCNL1Q9UK58 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
CCNL1Q9UK58 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC30.47■■■□□ 2.47
CCNL1Q9UK58 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
CCNL1Q9UK58 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC30.46■■■□□ 2.47
CCNL1Q9UK58 EDA-201ENST00000338901 1233 ntBASIC30.46■■■□□ 2.47
CCNL1Q9UK58 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC30.46■■■□□ 2.47
CCNL1Q9UK58 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC30.46■■■□□ 2.47
CCNL1Q9UK58 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC30.46■■■□□ 2.47
CCNL1Q9UK58 AC024257.2-201ENST00000549699 147 ntBASIC30.46■■■□□ 2.47
CCNL1Q9UK58 SNX5-217ENST00000606557 1087 ntBASIC30.46■■■□□ 2.47
CCNL1Q9UK58 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
CCNL1Q9UK58 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC30.45■■■□□ 2.47
CCNL1Q9UK58 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC30.45■■■□□ 2.47
CCNL1Q9UK58 AP004609.3-201ENST00000610705 1884 ntBASIC30.45■■■□□ 2.47
CCNL1Q9UK58 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
CCNL1Q9UK58 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC30.45■■■□□ 2.47
CCNL1Q9UK58 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC30.45■■■□□ 2.47
CCNL1Q9UK58 AL355001.2-201ENST00000620617 1191 ntBASIC30.45■■■□□ 2.47
CCNL1Q9UK58 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC30.44■■■□□ 2.46
CCNL1Q9UK58 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
CCNL1Q9UK58 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
CCNL1Q9UK58 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
CCNL1Q9UK58 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC30.44■■■□□ 2.46
CCNL1Q9UK58 MIR6722-201ENST00000617286 78 ntBASIC30.44■■■□□ 2.46
CCNL1Q9UK58 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC30.44■■■□□ 2.46
CCNL1Q9UK58 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC30.44■■■□□ 2.46
CCNL1Q9UK58 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC30.44■■■□□ 2.46
CCNL1Q9UK58 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC30.43■■■□□ 2.46
CCNL1Q9UK58 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
CCNL1Q9UK58 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC30.43■■■□□ 2.46
CCNL1Q9UK58 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
CCNL1Q9UK58 AC105265.2-201ENST00000467189 838 ntBASIC30.42■■■□□ 2.46
CCNL1Q9UK58 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
CCNL1Q9UK58 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC30.42■■■□□ 2.46
CCNL1Q9UK58 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC30.41■■■□□ 2.46
CCNL1Q9UK58 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
CCNL1Q9UK58 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC30.41■■■□□ 2.46
CCNL1Q9UK58 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
CCNL1Q9UK58 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
CCNL1Q9UK58 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms