Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
ZFYVE28Q9HCC9 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC27.4■■□□□ 1.98
ZFYVE28Q9HCC9 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
ZFYVE28Q9HCC9 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC27.4■■□□□ 1.98
ZFYVE28Q9HCC9 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
ZFYVE28Q9HCC9 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC27.4■■□□□ 1.98
ZFYVE28Q9HCC9 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC27.4■■□□□ 1.98
ZFYVE28Q9HCC9 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
ZFYVE28Q9HCC9 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
ZFYVE28Q9HCC9 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC27.39■■□□□ 1.98
ZFYVE28Q9HCC9 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
ZFYVE28Q9HCC9 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC27.38■■□□□ 1.97
ZFYVE28Q9HCC9 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC27.38■■□□□ 1.97
ZFYVE28Q9HCC9 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC27.38■■□□□ 1.97
ZFYVE28Q9HCC9 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
ZFYVE28Q9HCC9 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC27.37■■□□□ 1.97
ZFYVE28Q9HCC9 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
ZFYVE28Q9HCC9 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC27.37■■□□□ 1.97
ZFYVE28Q9HCC9 HYI-206ENST00000372434 1025 ntTSL 5 BASIC27.37■■□□□ 1.97
ZFYVE28Q9HCC9 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
ZFYVE28Q9HCC9 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC27.37■■□□□ 1.97
ZFYVE28Q9HCC9 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
ZFYVE28Q9HCC9 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
ZFYVE28Q9HCC9 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
ZFYVE28Q9HCC9 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC27.36■■□□□ 1.97
ZFYVE28Q9HCC9 EDA-201ENST00000338901 1233 ntBASIC27.36■■□□□ 1.97
ZFYVE28Q9HCC9 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC27.36■■□□□ 1.97
ZFYVE28Q9HCC9 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC27.36■■□□□ 1.97
ZFYVE28Q9HCC9 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC27.36■■□□□ 1.97
ZFYVE28Q9HCC9 AL355001.2-201ENST00000620617 1191 ntBASIC27.36■■□□□ 1.97
ZFYVE28Q9HCC9 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC27.36■■□□□ 1.97
ZFYVE28Q9HCC9 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
ZFYVE28Q9HCC9 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
ZFYVE28Q9HCC9 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC27.35■■□□□ 1.97
ZFYVE28Q9HCC9 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC27.35■■□□□ 1.97
ZFYVE28Q9HCC9 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC27.35■■□□□ 1.97
ZFYVE28Q9HCC9 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC27.34■■□□□ 1.97
ZFYVE28Q9HCC9 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC27.34■■□□□ 1.97
ZFYVE28Q9HCC9 ABCB10P1-201ENST00000614297 2181 ntBASIC27.34■■□□□ 1.97
ZFYVE28Q9HCC9 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
ZFYVE28Q9HCC9 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC27.34■■□□□ 1.97
ZFYVE28Q9HCC9 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC27.34■■□□□ 1.97
ZFYVE28Q9HCC9 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC27.34■■□□□ 1.97
ZFYVE28Q9HCC9 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC27.34■■□□□ 1.97
ZFYVE28Q9HCC9 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
ZFYVE28Q9HCC9 DRD5P2-201ENST00000421395 2012 ntBASIC27.33■■□□□ 1.97
ZFYVE28Q9HCC9 LINC01003-201ENST00000564834 1764 ntBASIC27.33■■□□□ 1.97
ZFYVE28Q9HCC9 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
ZFYVE28Q9HCC9 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
ZFYVE28Q9HCC9 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC27.33■■□□□ 1.97
ZFYVE28Q9HCC9 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
ZFYVE28Q9HCC9 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
ZFYVE28Q9HCC9 CLTA-206ENST00000466396 695 ntTSL 2 BASIC27.32■■□□□ 1.96
ZFYVE28Q9HCC9 MIR6722-201ENST00000617286 78 ntBASIC27.32■■□□□ 1.96
ZFYVE28Q9HCC9 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC27.32■■□□□ 1.96
ZFYVE28Q9HCC9 SNAI3-AS1-204ENST00000567997 2048 ntBASIC27.32■■□□□ 1.96
ZFYVE28Q9HCC9 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
ZFYVE28Q9HCC9 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
ZFYVE28Q9HCC9 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
ZFYVE28Q9HCC9 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC27.31■■□□□ 1.96
ZFYVE28Q9HCC9 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC27.31■■□□□ 1.96
ZFYVE28Q9HCC9 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
ZFYVE28Q9HCC9 AC024257.2-201ENST00000549699 147 ntBASIC27.31■■□□□ 1.96
ZFYVE28Q9HCC9 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
ZFYVE28Q9HCC9 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
ZFYVE28Q9HCC9 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
ZFYVE28Q9HCC9 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC27.3■■□□□ 1.96
ZFYVE28Q9HCC9 SRD5A1P1-201ENST00000442297 786 ntBASIC27.3■■□□□ 1.96
ZFYVE28Q9HCC9 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
ZFYVE28Q9HCC9 ST7-205ENST00000393446 2114 ntTSL 5 BASIC27.29■■□□□ 1.96
ZFYVE28Q9HCC9 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
ZFYVE28Q9HCC9 PARL-206ENST00000435888 1098 ntTSL 5 BASIC27.29■■□□□ 1.96
ZFYVE28Q9HCC9 AC105265.2-201ENST00000467189 838 ntBASIC27.29■■□□□ 1.96
ZFYVE28Q9HCC9 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC27.29■■□□□ 1.96
ZFYVE28Q9HCC9 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC27.29■■□□□ 1.96
ZFYVE28Q9HCC9 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
ZFYVE28Q9HCC9 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
ZFYVE28Q9HCC9 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
ZFYVE28Q9HCC9 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC27.28■■□□□ 1.96
ZFYVE28Q9HCC9 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
ZFYVE28Q9HCC9 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC27.28■■□□□ 1.96
ZFYVE28Q9HCC9 SNX5-217ENST00000606557 1087 ntBASIC27.28■■□□□ 1.96
ZFYVE28Q9HCC9 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
ZFYVE28Q9HCC9 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC27.28■■□□□ 1.96
ZFYVE28Q9HCC9 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC27.28■■□□□ 1.96
ZFYVE28Q9HCC9 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC27.27■■□□□ 1.96
ZFYVE28Q9HCC9 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC27.27■■□□□ 1.96
ZFYVE28Q9HCC9 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC27.27■■□□□ 1.96
ZFYVE28Q9HCC9 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
ZFYVE28Q9HCC9 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
ZFYVE28Q9HCC9 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC27.26■■□□□ 1.96
ZFYVE28Q9HCC9 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
ZFYVE28Q9HCC9 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC27.26■■□□□ 1.95
ZFYVE28Q9HCC9 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC27.26■■□□□ 1.95
ZFYVE28Q9HCC9 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC27.26■■□□□ 1.95
ZFYVE28Q9HCC9 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
ZFYVE28Q9HCC9 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC27.25■■□□□ 1.95
ZFYVE28Q9HCC9 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
ZFYVE28Q9HCC9 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
ZFYVE28Q9HCC9 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms