Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC34.88■■■■□ 3.17
SCAF1Q9H7N4 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC34.88■■■■□ 3.17
SCAF1Q9H7N4 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC34.87■■■■□ 3.17
SCAF1Q9H7N4 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC34.87■■■■□ 3.17
SCAF1Q9H7N4 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
SCAF1Q9H7N4 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC34.87■■■■□ 3.17
SCAF1Q9H7N4 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC34.87■■■■□ 3.17
SCAF1Q9H7N4 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC34.87■■■■□ 3.17
SCAF1Q9H7N4 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
SCAF1Q9H7N4 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC34.86■■■■□ 3.17
SCAF1Q9H7N4 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC34.86■■■■□ 3.17
SCAF1Q9H7N4 TSPY9P-201ENST00000440215 945 ntBASIC34.86■■■■□ 3.17
SCAF1Q9H7N4 TSPY11P-201ENST00000442607 1045 ntBASIC34.86■■■■□ 3.17
SCAF1Q9H7N4 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC34.86■■■■□ 3.17
SCAF1Q9H7N4 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
SCAF1Q9H7N4 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC34.86■■■■□ 3.17
SCAF1Q9H7N4 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC34.85■■■■□ 3.17
SCAF1Q9H7N4 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC34.85■■■■□ 3.17
SCAF1Q9H7N4 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC34.85■■■■□ 3.17
SCAF1Q9H7N4 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
SCAF1Q9H7N4 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC34.84■■■■□ 3.17
SCAF1Q9H7N4 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC34.84■■■■□ 3.17
SCAF1Q9H7N4 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC34.84■■■■□ 3.17
SCAF1Q9H7N4 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC34.84■■■■□ 3.17
SCAF1Q9H7N4 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC34.84■■■■□ 3.17
SCAF1Q9H7N4 SRR-208ENST00000576848 588 ntTSL 4 BASIC34.83■■■■□ 3.17
SCAF1Q9H7N4 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC34.83■■■■□ 3.17
SCAF1Q9H7N4 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
SCAF1Q9H7N4 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC34.82■■■■□ 3.17
SCAF1Q9H7N4 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC34.82■■■■□ 3.17
SCAF1Q9H7N4 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC34.82■■■■□ 3.17
SCAF1Q9H7N4 CLDN5-201ENST00000403084 2357 ntBASIC34.82■■■■□ 3.17
SCAF1Q9H7N4 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC34.82■■■■□ 3.16
SCAF1Q9H7N4 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC34.82■■■■□ 3.16
SCAF1Q9H7N4 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
SCAF1Q9H7N4 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC34.81■■■■□ 3.16
SCAF1Q9H7N4 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC34.81■■■■□ 3.16
SCAF1Q9H7N4 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
SCAF1Q9H7N4 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC34.81■■■■□ 3.16
SCAF1Q9H7N4 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
SCAF1Q9H7N4 ZNRF2P3-201ENST00000424200 374 ntBASIC34.81■■■■□ 3.16
SCAF1Q9H7N4 AC096631.2-201ENST00000436136 790 ntBASIC34.81■■■■□ 3.16
SCAF1Q9H7N4 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC34.81■■■■□ 3.16
SCAF1Q9H7N4 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC34.81■■■■□ 3.16
SCAF1Q9H7N4 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC34.81■■■■□ 3.16
SCAF1Q9H7N4 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC34.8■■■■□ 3.16
SCAF1Q9H7N4 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC34.8■■■■□ 3.16
SCAF1Q9H7N4 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
SCAF1Q9H7N4 PFN2-211ENST00000489155 636 ntTSL 4 BASIC34.8■■■■□ 3.16
SCAF1Q9H7N4 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC34.79■■■■□ 3.16
SCAF1Q9H7N4 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC34.79■■■■□ 3.16
SCAF1Q9H7N4 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
SCAF1Q9H7N4 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC34.79■■■■□ 3.16
SCAF1Q9H7N4 RPP21-222ENST00000433076 577 ntTSL 2 BASIC34.79■■■■□ 3.16
SCAF1Q9H7N4 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC34.79■■■■□ 3.16
SCAF1Q9H7N4 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
SCAF1Q9H7N4 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC34.78■■■■□ 3.16
SCAF1Q9H7N4 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC34.78■■■■□ 3.16
SCAF1Q9H7N4 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC34.78■■■■□ 3.16
SCAF1Q9H7N4 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC34.77■■■■□ 3.16
SCAF1Q9H7N4 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC34.77■■■■□ 3.16
SCAF1Q9H7N4 MEST-211ENST00000437945 1455 ntTSL 5 BASIC34.77■■■■□ 3.16
SCAF1Q9H7N4 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC34.77■■■■□ 3.16
SCAF1Q9H7N4 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
SCAF1Q9H7N4 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
SCAF1Q9H7N4 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC34.77■■■■□ 3.16
SCAF1Q9H7N4 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC34.77■■■■□ 3.16
SCAF1Q9H7N4 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC34.77■■■■□ 3.16
SCAF1Q9H7N4 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC34.77■■■■□ 3.16
SCAF1Q9H7N4 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC34.77■■■■□ 3.16
SCAF1Q9H7N4 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
SCAF1Q9H7N4 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
SCAF1Q9H7N4 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC34.76■■■■□ 3.16
SCAF1Q9H7N4 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.16
SCAF1Q9H7N4 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC34.76■■■■□ 3.16
SCAF1Q9H7N4 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.15
SCAF1Q9H7N4 AC019171.1-201ENST00000601251 1056 ntBASIC34.76■■■■□ 3.15
SCAF1Q9H7N4 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC34.75■■■■□ 3.15
SCAF1Q9H7N4 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
SCAF1Q9H7N4 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC34.75■■■■□ 3.15
SCAF1Q9H7N4 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC34.75■■■■□ 3.15
SCAF1Q9H7N4 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC34.75■■■■□ 3.15
SCAF1Q9H7N4 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC34.75■■■■□ 3.15
SCAF1Q9H7N4 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC34.74■■■■□ 3.15
SCAF1Q9H7N4 AP004833.2-201ENST00000532228 1454 ntBASIC34.74■■■■□ 3.15
SCAF1Q9H7N4 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC34.74■■■■□ 3.15
SCAF1Q9H7N4 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC34.74■■■■□ 3.15
SCAF1Q9H7N4 AC026271.2-201ENST00000428091 497 ntBASIC34.74■■■■□ 3.15
SCAF1Q9H7N4 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC34.73■■■■□ 3.15
SCAF1Q9H7N4 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC34.73■■■■□ 3.15
SCAF1Q9H7N4 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC34.73■■■■□ 3.15
SCAF1Q9H7N4 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC34.73■■■■□ 3.15
SCAF1Q9H7N4 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC34.73■■■■□ 3.15
SCAF1Q9H7N4 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC34.73■■■■□ 3.15
SCAF1Q9H7N4 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC34.73■■■■□ 3.15
SCAF1Q9H7N4 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
SCAF1Q9H7N4 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC34.72■■■■□ 3.15
SCAF1Q9H7N4 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC34.72■■■■□ 3.15
SCAF1Q9H7N4 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC34.72■■■■□ 3.15
SCAF1Q9H7N4 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC34.72■■■■□ 3.15
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms