Protein–RNA interactions for Protein: Q9H000

MKRN2, Probable E3 ubiquitin-protein ligase makorin-2, humanhuman

Known RBP Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKRN2Q9H000 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
MKRN2Q9H000 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC23.85■■□□□ 1.41
MKRN2Q9H000 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC23.85■■□□□ 1.41
MKRN2Q9H000 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC23.84■■□□□ 1.41
MKRN2Q9H000 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
MKRN2Q9H000 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
MKRN2Q9H000 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
MKRN2Q9H000 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.84■■□□□ 1.41
MKRN2Q9H000 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
MKRN2Q9H000 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
MKRN2Q9H000 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
MKRN2Q9H000 PEMT-206ENST00000435340 960 ntTSL 5 BASIC23.83■■□□□ 1.41
MKRN2Q9H000 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
MKRN2Q9H000 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
MKRN2Q9H000 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC23.83■■□□□ 1.41
MKRN2Q9H000 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
MKRN2Q9H000 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
MKRN2Q9H000 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC23.82■■□□□ 1.4
MKRN2Q9H000 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
MKRN2Q9H000 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.82■■□□□ 1.4
MKRN2Q9H000 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC23.82■■□□□ 1.4
MKRN2Q9H000 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
MKRN2Q9H000 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
MKRN2Q9H000 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
MKRN2Q9H000 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
MKRN2Q9H000 FOXO3B-201ENST00000395675 1928 ntBASIC23.81■■□□□ 1.4
MKRN2Q9H000 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
MKRN2Q9H000 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
MKRN2Q9H000 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
MKRN2Q9H000 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
MKRN2Q9H000 SENP5-202ENST00000419026 973 ntTSL 3 BASIC23.81■■□□□ 1.4
MKRN2Q9H000 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
MKRN2Q9H000 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.81■■□□□ 1.4
MKRN2Q9H000 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
MKRN2Q9H000 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
MKRN2Q9H000 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC23.8■■□□□ 1.4
MKRN2Q9H000 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC23.79■■□□□ 1.4
MKRN2Q9H000 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
MKRN2Q9H000 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC23.79■■□□□ 1.4
MKRN2Q9H000 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
MKRN2Q9H000 SSSCA1-AS1-201ENST00000567594 614 ntBASIC23.79■■□□□ 1.4
MKRN2Q9H000 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
MKRN2Q9H000 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
MKRN2Q9H000 ERN1-208ENST00000606895 2068 ntBASIC23.79■■□□□ 1.4
MKRN2Q9H000 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
MKRN2Q9H000 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.78■■□□□ 1.4
MKRN2Q9H000 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC23.78■■□□□ 1.4
MKRN2Q9H000 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC23.78■■□□□ 1.4
MKRN2Q9H000 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.78■■□□□ 1.4
MKRN2Q9H000 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.78■■□□□ 1.4
MKRN2Q9H000 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.78■■□□□ 1.4
MKRN2Q9H000 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC23.78■■□□□ 1.4
MKRN2Q9H000 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
MKRN2Q9H000 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
MKRN2Q9H000 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC23.77■■□□□ 1.4
MKRN2Q9H000 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
MKRN2Q9H000 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC23.77■■□□□ 1.4
MKRN2Q9H000 TRIR-202ENST00000588213 841 ntTSL 3 BASIC23.77■■□□□ 1.4
MKRN2Q9H000 AC010997.5-201ENST00000609182 354 ntBASIC23.77■■□□□ 1.4
MKRN2Q9H000 AC096887.2-201ENST00000623443 1957 ntBASIC23.77■■□□□ 1.4
MKRN2Q9H000 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
MKRN2Q9H000 TK2-202ENST00000417693 1046 ntTSL 2 BASIC23.76■■□□□ 1.39
MKRN2Q9H000 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
MKRN2Q9H000 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.76■■□□□ 1.39
MKRN2Q9H000 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.76■■□□□ 1.39
MKRN2Q9H000 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC23.76■■□□□ 1.39
MKRN2Q9H000 AF131216.4-201ENST00000638924 1588 ntBASIC23.76■■□□□ 1.39
MKRN2Q9H000 AC135731.1-201ENST00000569415 2548 ntBASIC23.76■■□□□ 1.39
MKRN2Q9H000 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
MKRN2Q9H000 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
MKRN2Q9H000 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
MKRN2Q9H000 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.75■■□□□ 1.39
MKRN2Q9H000 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC23.75■■□□□ 1.39
MKRN2Q9H000 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC23.75■■□□□ 1.39
MKRN2Q9H000 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
MKRN2Q9H000 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
MKRN2Q9H000 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
MKRN2Q9H000 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
MKRN2Q9H000 AC131281.2-201ENST00000520478 145 ntBASIC23.74■■□□□ 1.39
MKRN2Q9H000 MTDHP2-201ENST00000601468 714 ntBASIC23.74■■□□□ 1.39
MKRN2Q9H000 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC23.74■■□□□ 1.39
MKRN2Q9H000 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
MKRN2Q9H000 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
MKRN2Q9H000 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
MKRN2Q9H000 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
MKRN2Q9H000 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
MKRN2Q9H000 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
MKRN2Q9H000 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
MKRN2Q9H000 LSM4-201ENST00000252816 986 ntTSL 2 BASIC23.73■■□□□ 1.39
MKRN2Q9H000 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
MKRN2Q9H000 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC23.73■■□□□ 1.39
MKRN2Q9H000 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC23.73■■□□□ 1.39
MKRN2Q9H000 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.73■■□□□ 1.39
MKRN2Q9H000 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.73■■□□□ 1.39
MKRN2Q9H000 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
MKRN2Q9H000 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
MKRN2Q9H000 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
MKRN2Q9H000 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
MKRN2Q9H000 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
MKRN2Q9H000 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.72■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms