Protein–RNA interactions for Protein: Q96MT3

PRICKLE1, Prickle-like protein 1, humanhuman

Predicted RBP Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1Q96MT3 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC24.44■■□□□ 1.5
PRICKLE1Q96MT3 AL035685.1-201ENST00000636663 812 ntBASIC24.44■■□□□ 1.5
PRICKLE1Q96MT3 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PRICKLE1Q96MT3 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PRICKLE1Q96MT3 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC24.44■■□□□ 1.5
PRICKLE1Q96MT3 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC24.44■■□□□ 1.5
PRICKLE1Q96MT3 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PRICKLE1Q96MT3 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC24.43■■□□□ 1.5
PRICKLE1Q96MT3 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC24.43■■□□□ 1.5
PRICKLE1Q96MT3 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC24.43■■□□□ 1.5
PRICKLE1Q96MT3 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
PRICKLE1Q96MT3 AC009299.2-201ENST00000482477 511 ntBASIC24.43■■□□□ 1.5
PRICKLE1Q96MT3 AC022616.5-201ENST00000518796 181 ntBASIC24.43■■□□□ 1.5
PRICKLE1Q96MT3 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
PRICKLE1Q96MT3 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC24.42■■□□□ 1.5
PRICKLE1Q96MT3 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
PRICKLE1Q96MT3 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC24.42■■□□□ 1.5
PRICKLE1Q96MT3 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC24.42■■□□□ 1.5
PRICKLE1Q96MT3 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
PRICKLE1Q96MT3 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PRICKLE1Q96MT3 AC145676.1-201ENST00000514988 2004 ntBASIC24.42■■□□□ 1.5
PRICKLE1Q96MT3 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PRICKLE1Q96MT3 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PRICKLE1Q96MT3 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PRICKLE1Q96MT3 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PRICKLE1Q96MT3 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
PRICKLE1Q96MT3 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC24.4■■□□□ 1.5
PRICKLE1Q96MT3 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC24.4■■□□□ 1.5
PRICKLE1Q96MT3 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC24.4■■□□□ 1.5
PRICKLE1Q96MT3 AL592295.1-201ENST00000400984 884 ntBASIC24.4■■□□□ 1.5
PRICKLE1Q96MT3 PRTG-204ENST00000561292 833 ntTSL 3 BASIC24.4■■□□□ 1.5
PRICKLE1Q96MT3 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC24.4■■□□□ 1.5
PRICKLE1Q96MT3 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
PRICKLE1Q96MT3 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.5
PRICKLE1Q96MT3 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
PRICKLE1Q96MT3 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
PRICKLE1Q96MT3 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
PRICKLE1Q96MT3 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
PRICKLE1Q96MT3 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
PRICKLE1Q96MT3 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
PRICKLE1Q96MT3 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PRICKLE1Q96MT3 FOXO3B-201ENST00000395675 1928 ntBASIC24.38■■□□□ 1.49
PRICKLE1Q96MT3 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PRICKLE1Q96MT3 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC24.38■■□□□ 1.49
PRICKLE1Q96MT3 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
PRICKLE1Q96MT3 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
PRICKLE1Q96MT3 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PRICKLE1Q96MT3 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
PRICKLE1Q96MT3 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PRICKLE1Q96MT3 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
PRICKLE1Q96MT3 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC24.36■■□□□ 1.49
PRICKLE1Q96MT3 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PRICKLE1Q96MT3 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PRICKLE1Q96MT3 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
PRICKLE1Q96MT3 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC24.36■■□□□ 1.49
PRICKLE1Q96MT3 AC120024.1-201ENST00000562672 995 ntBASIC24.36■■□□□ 1.49
PRICKLE1Q96MT3 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PRICKLE1Q96MT3 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC24.36■■□□□ 1.49
PRICKLE1Q96MT3 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC24.35■■□□□ 1.49
PRICKLE1Q96MT3 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC24.35■■□□□ 1.49
PRICKLE1Q96MT3 TK2-216ENST00000564917 1156 ntTSL 3 BASIC24.35■■□□□ 1.49
PRICKLE1Q96MT3 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PRICKLE1Q96MT3 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PRICKLE1Q96MT3 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PRICKLE1Q96MT3 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
PRICKLE1Q96MT3 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC24.34■■□□□ 1.49
PRICKLE1Q96MT3 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
PRICKLE1Q96MT3 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PRICKLE1Q96MT3 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PRICKLE1Q96MT3 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
PRICKLE1Q96MT3 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PRICKLE1Q96MT3 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
PRICKLE1Q96MT3 KRT18P24-201ENST00000344739 1156 ntBASIC24.33■■□□□ 1.49
PRICKLE1Q96MT3 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PRICKLE1Q96MT3 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
PRICKLE1Q96MT3 THA1P-201ENST00000590384 1145 ntBASIC24.33■■□□□ 1.49
PRICKLE1Q96MT3 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC24.33■■□□□ 1.49
PRICKLE1Q96MT3 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
PRICKLE1Q96MT3 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC24.32■■□□□ 1.48
PRICKLE1Q96MT3 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
PRICKLE1Q96MT3 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PRICKLE1Q96MT3 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PRICKLE1Q96MT3 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
PRICKLE1Q96MT3 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC24.32■■□□□ 1.48
PRICKLE1Q96MT3 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
PRICKLE1Q96MT3 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PRICKLE1Q96MT3 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
PRICKLE1Q96MT3 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC24.32■■□□□ 1.48
PRICKLE1Q96MT3 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
PRICKLE1Q96MT3 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PRICKLE1Q96MT3 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PRICKLE1Q96MT3 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PRICKLE1Q96MT3 TRIR-205ENST00000592273 783 ntTSL 3 BASIC24.31■■□□□ 1.48
PRICKLE1Q96MT3 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PRICKLE1Q96MT3 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC24.31■■□□□ 1.48
PRICKLE1Q96MT3 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
PRICKLE1Q96MT3 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
PRICKLE1Q96MT3 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
PRICKLE1Q96MT3 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC24.29■■□□□ 1.48
PRICKLE1Q96MT3 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms