Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 AC022616.5-201ENST00000518796 181 ntBASIC22.96■■□□□ 1.27
RAB42Q8N4Z0 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC22.96■■□□□ 1.27
RAB42Q8N4Z0 AC010980.1-201ENST00000587192 1142 ntBASIC22.96■■□□□ 1.27
RAB42Q8N4Z0 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RAB42Q8N4Z0 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RAB42Q8N4Z0 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC22.96■■□□□ 1.27
RAB42Q8N4Z0 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
RAB42Q8N4Z0 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
RAB42Q8N4Z0 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
RAB42Q8N4Z0 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC22.95■■□□□ 1.26
RAB42Q8N4Z0 FOXO3B-201ENST00000395675 1928 ntBASIC22.95■■□□□ 1.26
RAB42Q8N4Z0 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC22.95■■□□□ 1.26
RAB42Q8N4Z0 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
RAB42Q8N4Z0 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
RAB42Q8N4Z0 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC22.94■■□□□ 1.26
RAB42Q8N4Z0 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
RAB42Q8N4Z0 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
RAB42Q8N4Z0 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
RAB42Q8N4Z0 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC22.94■■□□□ 1.26
RAB42Q8N4Z0 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
RAB42Q8N4Z0 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC22.93■■□□□ 1.26
RAB42Q8N4Z0 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
RAB42Q8N4Z0 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC22.93■■□□□ 1.26
RAB42Q8N4Z0 IDNK-201ENST00000376417 511 ntTSL 5 BASIC22.93■■□□□ 1.26
RAB42Q8N4Z0 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
RAB42Q8N4Z0 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
RAB42Q8N4Z0 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC22.93■■□□□ 1.26
RAB42Q8N4Z0 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC22.93■■□□□ 1.26
RAB42Q8N4Z0 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RAB42Q8N4Z0 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RAB42Q8N4Z0 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
RAB42Q8N4Z0 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RAB42Q8N4Z0 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RAB42Q8N4Z0 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
RAB42Q8N4Z0 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
RAB42Q8N4Z0 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC22.91■■□□□ 1.26
RAB42Q8N4Z0 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
RAB42Q8N4Z0 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
RAB42Q8N4Z0 BEX3-202ENST00000372634 753 ntTSL 2 BASIC22.91■■□□□ 1.26
RAB42Q8N4Z0 YBX1P4-201ENST00000392794 808 ntBASIC22.91■■□□□ 1.26
RAB42Q8N4Z0 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC22.91■■□□□ 1.26
RAB42Q8N4Z0 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC22.91■■□□□ 1.26
RAB42Q8N4Z0 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
RAB42Q8N4Z0 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC22.9■■□□□ 1.26
RAB42Q8N4Z0 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RAB42Q8N4Z0 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
RAB42Q8N4Z0 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RAB42Q8N4Z0 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC22.89■■□□□ 1.26
RAB42Q8N4Z0 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC22.89■■□□□ 1.25
RAB42Q8N4Z0 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RAB42Q8N4Z0 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
RAB42Q8N4Z0 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
RAB42Q8N4Z0 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RAB42Q8N4Z0 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RAB42Q8N4Z0 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RAB42Q8N4Z0 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC22.88■■□□□ 1.25
RAB42Q8N4Z0 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
RAB42Q8N4Z0 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC22.88■■□□□ 1.25
RAB42Q8N4Z0 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
RAB42Q8N4Z0 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RAB42Q8N4Z0 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RAB42Q8N4Z0 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
RAB42Q8N4Z0 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC22.87■■□□□ 1.25
RAB42Q8N4Z0 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
RAB42Q8N4Z0 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
RAB42Q8N4Z0 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
RAB42Q8N4Z0 SSSCA1-AS1-201ENST00000567594 614 ntBASIC22.87■■□□□ 1.25
RAB42Q8N4Z0 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RAB42Q8N4Z0 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RAB42Q8N4Z0 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
RAB42Q8N4Z0 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RAB42Q8N4Z0 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RAB42Q8N4Z0 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RAB42Q8N4Z0 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
RAB42Q8N4Z0 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
RAB42Q8N4Z0 MIR4508-201ENST00000584178 70 ntBASIC22.85■■□□□ 1.25
RAB42Q8N4Z0 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC22.85■■□□□ 1.25
RAB42Q8N4Z0 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RAB42Q8N4Z0 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
RAB42Q8N4Z0 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RAB42Q8N4Z0 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
RAB42Q8N4Z0 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
RAB42Q8N4Z0 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC22.84■■□□□ 1.25
RAB42Q8N4Z0 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
RAB42Q8N4Z0 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
RAB42Q8N4Z0 PVT1_1.1-201ENST00000615125 194 ntBASIC22.84■■□□□ 1.25
RAB42Q8N4Z0 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
RAB42Q8N4Z0 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
RAB42Q8N4Z0 KRT8P33-201ENST00000508125 1423 ntBASIC22.83■■□□□ 1.25
RAB42Q8N4Z0 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
RAB42Q8N4Z0 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC22.83■■□□□ 1.24
RAB42Q8N4Z0 SLC6A10P-202ENST00000431994 2058 ntBASIC22.83■■□□□ 1.24
RAB42Q8N4Z0 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC22.83■■□□□ 1.24
RAB42Q8N4Z0 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
RAB42Q8N4Z0 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
RAB42Q8N4Z0 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
RAB42Q8N4Z0 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
RAB42Q8N4Z0 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC22.82■■□□□ 1.24
RAB42Q8N4Z0 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
RAB42Q8N4Z0 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC22.81■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms