Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
ARHGEF39Q8N4T4 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC22.44■■□□□ 1.18
ARHGEF39Q8N4T4 AL451085.2-201ENST00000605085 799 ntBASIC22.44■■□□□ 1.18
ARHGEF39Q8N4T4 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
ARHGEF39Q8N4T4 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC22.43■■□□□ 1.18
ARHGEF39Q8N4T4 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
ARHGEF39Q8N4T4 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
ARHGEF39Q8N4T4 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
ARHGEF39Q8N4T4 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
ARHGEF39Q8N4T4 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC22.42■■□□□ 1.18
ARHGEF39Q8N4T4 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC22.42■■□□□ 1.18
ARHGEF39Q8N4T4 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
ARHGEF39Q8N4T4 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC22.42■■□□□ 1.18
ARHGEF39Q8N4T4 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
ARHGEF39Q8N4T4 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
ARHGEF39Q8N4T4 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
ARHGEF39Q8N4T4 SLC6A10P-202ENST00000431994 2058 ntBASIC22.4■■□□□ 1.18
ARHGEF39Q8N4T4 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
ARHGEF39Q8N4T4 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC22.4■■□□□ 1.18
ARHGEF39Q8N4T4 KRT18P24-201ENST00000344739 1156 ntBASIC22.4■■□□□ 1.18
ARHGEF39Q8N4T4 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
ARHGEF39Q8N4T4 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
ARHGEF39Q8N4T4 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
ARHGEF39Q8N4T4 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
ARHGEF39Q8N4T4 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
ARHGEF39Q8N4T4 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC22.39■■□□□ 1.18
ARHGEF39Q8N4T4 AL031848.2-201ENST00000607670 837 ntBASIC22.39■■□□□ 1.17
ARHGEF39Q8N4T4 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
ARHGEF39Q8N4T4 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
ARHGEF39Q8N4T4 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
ARHGEF39Q8N4T4 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
ARHGEF39Q8N4T4 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
ARHGEF39Q8N4T4 AC120024.1-201ENST00000562672 995 ntBASIC22.38■■□□□ 1.17
ARHGEF39Q8N4T4 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
ARHGEF39Q8N4T4 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
ARHGEF39Q8N4T4 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC22.37■■□□□ 1.17
ARHGEF39Q8N4T4 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
ARHGEF39Q8N4T4 PRTG-204ENST00000561292 833 ntTSL 3 BASIC22.37■■□□□ 1.17
ARHGEF39Q8N4T4 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
ARHGEF39Q8N4T4 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
ARHGEF39Q8N4T4 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
ARHGEF39Q8N4T4 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
ARHGEF39Q8N4T4 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC22.36■■□□□ 1.17
ARHGEF39Q8N4T4 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
ARHGEF39Q8N4T4 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC22.35■■□□□ 1.17
ARHGEF39Q8N4T4 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
ARHGEF39Q8N4T4 CEBPA-AS1-201ENST00000592982 2198 ntBASIC22.35■■□□□ 1.17
ARHGEF39Q8N4T4 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ARHGEF39Q8N4T4 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ARHGEF39Q8N4T4 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC22.35■■□□□ 1.17
ARHGEF39Q8N4T4 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
ARHGEF39Q8N4T4 TK2-216ENST00000564917 1156 ntTSL 3 BASIC22.35■■□□□ 1.17
ARHGEF39Q8N4T4 SSSCA1-AS1-201ENST00000567594 614 ntBASIC22.35■■□□□ 1.17
ARHGEF39Q8N4T4 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC22.35■■□□□ 1.17
ARHGEF39Q8N4T4 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ARHGEF39Q8N4T4 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
ARHGEF39Q8N4T4 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC22.34■■□□□ 1.17
ARHGEF39Q8N4T4 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC22.34■■□□□ 1.17
ARHGEF39Q8N4T4 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
ARHGEF39Q8N4T4 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC22.34■■□□□ 1.17
ARHGEF39Q8N4T4 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC22.34■■□□□ 1.17
ARHGEF39Q8N4T4 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
ARHGEF39Q8N4T4 AC009299.2-201ENST00000482477 511 ntBASIC22.34■■□□□ 1.17
ARHGEF39Q8N4T4 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
ARHGEF39Q8N4T4 AC011551.1-201ENST00000614101 683 ntBASIC22.34■■□□□ 1.17
ARHGEF39Q8N4T4 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
ARHGEF39Q8N4T4 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
ARHGEF39Q8N4T4 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC22.33■■□□□ 1.17
ARHGEF39Q8N4T4 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
ARHGEF39Q8N4T4 AL035685.1-201ENST00000636663 812 ntBASIC22.33■■□□□ 1.17
ARHGEF39Q8N4T4 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
ARHGEF39Q8N4T4 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC22.33■■□□□ 1.16
ARHGEF39Q8N4T4 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
ARHGEF39Q8N4T4 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC22.32■■□□□ 1.16
ARHGEF39Q8N4T4 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
ARHGEF39Q8N4T4 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
ARHGEF39Q8N4T4 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
ARHGEF39Q8N4T4 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
ARHGEF39Q8N4T4 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
ARHGEF39Q8N4T4 SHF-207ENST00000560540 2062 ntTSL 5 BASIC22.32■■□□□ 1.16
ARHGEF39Q8N4T4 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
ARHGEF39Q8N4T4 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
ARHGEF39Q8N4T4 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
ARHGEF39Q8N4T4 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC22.31■■□□□ 1.16
ARHGEF39Q8N4T4 THA1P-201ENST00000590384 1145 ntBASIC22.31■■□□□ 1.16
ARHGEF39Q8N4T4 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC22.31■■□□□ 1.16
ARHGEF39Q8N4T4 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC22.3■■□□□ 1.16
ARHGEF39Q8N4T4 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
ARHGEF39Q8N4T4 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
ARHGEF39Q8N4T4 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
ARHGEF39Q8N4T4 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC22.3■■□□□ 1.16
ARHGEF39Q8N4T4 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
ARHGEF39Q8N4T4 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC22.3■■□□□ 1.16
ARHGEF39Q8N4T4 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
ARHGEF39Q8N4T4 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC22.3■■□□□ 1.16
ARHGEF39Q8N4T4 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
ARHGEF39Q8N4T4 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC22.29■■□□□ 1.16
ARHGEF39Q8N4T4 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
ARHGEF39Q8N4T4 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
ARHGEF39Q8N4T4 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC22.29■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms