Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SIX5Q8N196 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
SIX5Q8N196 UNC93B3-201ENST00000308076 687 ntBASIC24.3■■□□□ 1.48
SIX5Q8N196 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SIX5Q8N196 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC24.3■■□□□ 1.48
SIX5Q8N196 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
SIX5Q8N196 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC24.3■■□□□ 1.48
SIX5Q8N196 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC24.3■■□□□ 1.48
SIX5Q8N196 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SIX5Q8N196 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC24.3■■□□□ 1.48
SIX5Q8N196 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SIX5Q8N196 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
SIX5Q8N196 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC24.29■■□□□ 1.48
SIX5Q8N196 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
SIX5Q8N196 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SIX5Q8N196 SUDS3P1-201ENST00000505831 966 ntBASIC24.28■■□□□ 1.48
SIX5Q8N196 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC24.28■■□□□ 1.48
SIX5Q8N196 AL031432.3-201ENST00000607698 485 ntBASIC24.28■■□□□ 1.48
SIX5Q8N196 AL136162.1-201ENST00000607711 1078 ntBASIC24.28■■□□□ 1.48
SIX5Q8N196 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SIX5Q8N196 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
SIX5Q8N196 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC24.27■■□□□ 1.48
SIX5Q8N196 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC24.27■■□□□ 1.48
SIX5Q8N196 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SIX5Q8N196 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
SIX5Q8N196 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC24.26■■□□□ 1.47
SIX5Q8N196 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
SIX5Q8N196 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
SIX5Q8N196 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SIX5Q8N196 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SIX5Q8N196 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
SIX5Q8N196 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC24.25■■□□□ 1.47
SIX5Q8N196 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
SIX5Q8N196 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SIX5Q8N196 HYI-206ENST00000372434 1025 ntTSL 5 BASIC24.24■■□□□ 1.47
SIX5Q8N196 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC24.24■■□□□ 1.47
SIX5Q8N196 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
SIX5Q8N196 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC24.24■■□□□ 1.47
SIX5Q8N196 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
SIX5Q8N196 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
SIX5Q8N196 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC24.23■■□□□ 1.47
SIX5Q8N196 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
SIX5Q8N196 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC24.23■■□□□ 1.47
SIX5Q8N196 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
SIX5Q8N196 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC24.23■■□□□ 1.47
SIX5Q8N196 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
SIX5Q8N196 AF131216.4-201ENST00000638924 1588 ntBASIC24.23■■□□□ 1.47
SIX5Q8N196 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
SIX5Q8N196 ABCB10P1-201ENST00000614297 2181 ntBASIC24.22■■□□□ 1.47
SIX5Q8N196 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
SIX5Q8N196 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
SIX5Q8N196 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
SIX5Q8N196 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC24.21■■□□□ 1.47
SIX5Q8N196 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC24.21■■□□□ 1.47
SIX5Q8N196 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC24.21■■□□□ 1.47
SIX5Q8N196 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC24.21■■□□□ 1.47
SIX5Q8N196 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
SIX5Q8N196 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
SIX5Q8N196 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC24.2■■□□□ 1.47
SIX5Q8N196 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
SIX5Q8N196 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
SIX5Q8N196 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
SIX5Q8N196 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC24.2■■□□□ 1.46
SIX5Q8N196 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC24.2■■□□□ 1.46
SIX5Q8N196 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC24.2■■□□□ 1.46
SIX5Q8N196 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
SIX5Q8N196 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
SIX5Q8N196 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
SIX5Q8N196 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
SIX5Q8N196 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
SIX5Q8N196 EDA-201ENST00000338901 1233 ntBASIC24.19■■□□□ 1.46
SIX5Q8N196 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC24.19■■□□□ 1.46
SIX5Q8N196 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
SIX5Q8N196 AL355001.2-201ENST00000620617 1191 ntBASIC24.19■■□□□ 1.46
SIX5Q8N196 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC24.19■■□□□ 1.46
SIX5Q8N196 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC24.19■■□□□ 1.46
SIX5Q8N196 AC142472.1-201ENST00000612013 1741 ntBASIC24.18■■□□□ 1.46
SIX5Q8N196 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC24.18■■□□□ 1.46
SIX5Q8N196 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
SIX5Q8N196 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
SIX5Q8N196 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC24.18■■□□□ 1.46
SIX5Q8N196 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
SIX5Q8N196 PARL-206ENST00000435888 1098 ntTSL 5 BASIC24.18■■□□□ 1.46
SIX5Q8N196 AC105265.2-201ENST00000467189 838 ntBASIC24.18■■□□□ 1.46
SIX5Q8N196 AC024257.2-201ENST00000549699 147 ntBASIC24.18■■□□□ 1.46
SIX5Q8N196 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC24.18■■□□□ 1.46
SIX5Q8N196 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
SIX5Q8N196 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
SIX5Q8N196 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
SIX5Q8N196 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
SIX5Q8N196 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
SIX5Q8N196 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
SIX5Q8N196 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
SIX5Q8N196 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SIX5Q8N196 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
SIX5Q8N196 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SIX5Q8N196 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
SIX5Q8N196 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
SIX5Q8N196 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SIX5Q8N196 CLTA-206ENST00000466396 695 ntTSL 2 BASIC24.16■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms