Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
PTCRAQ6ISU1 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
PTCRAQ6ISU1 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
PTCRAQ6ISU1 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
PTCRAQ6ISU1 PLD4-205ENST00000553861 667 ntTSL 2 BASIC24.8■■□□□ 1.56
PTCRAQ6ISU1 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC24.8■■□□□ 1.56
PTCRAQ6ISU1 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
PTCRAQ6ISU1 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PTCRAQ6ISU1 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
PTCRAQ6ISU1 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC24.79■■□□□ 1.56
PTCRAQ6ISU1 STOX2-205ENST00000513034 807 ntTSL 3 BASIC24.79■■□□□ 1.56
PTCRAQ6ISU1 AF131216.4-201ENST00000638924 1588 ntBASIC24.79■■□□□ 1.56
PTCRAQ6ISU1 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PTCRAQ6ISU1 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PTCRAQ6ISU1 MIR939-201ENST00000401314 82 ntBASIC24.78■■□□□ 1.56
PTCRAQ6ISU1 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC24.78■■□□□ 1.56
PTCRAQ6ISU1 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
PTCRAQ6ISU1 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PTCRAQ6ISU1 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
PTCRAQ6ISU1 AL449106.1-201ENST00000608517 1980 ntBASIC24.78■■□□□ 1.56
PTCRAQ6ISU1 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC24.78■■□□□ 1.56
PTCRAQ6ISU1 CLTA-206ENST00000466396 695 ntTSL 2 BASIC24.77■■□□□ 1.56
PTCRAQ6ISU1 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
PTCRAQ6ISU1 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC24.77■■□□□ 1.56
PTCRAQ6ISU1 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC24.77■■□□□ 1.56
PTCRAQ6ISU1 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
PTCRAQ6ISU1 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC24.75■■□□□ 1.55
PTCRAQ6ISU1 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC24.75■■□□□ 1.55
PTCRAQ6ISU1 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC24.75■■□□□ 1.55
PTCRAQ6ISU1 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
PTCRAQ6ISU1 AP001330.3-201ENST00000520123 633 ntBASIC24.74■■□□□ 1.55
PTCRAQ6ISU1 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
PTCRAQ6ISU1 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PTCRAQ6ISU1 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PTCRAQ6ISU1 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PTCRAQ6ISU1 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC24.73■■□□□ 1.55
PTCRAQ6ISU1 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC24.73■■□□□ 1.55
PTCRAQ6ISU1 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC24.72■■□□□ 1.55
PTCRAQ6ISU1 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
PTCRAQ6ISU1 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PTCRAQ6ISU1 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
PTCRAQ6ISU1 AC091305.1-201ENST00000479476 895 ntBASIC24.72■■□□□ 1.55
PTCRAQ6ISU1 AC090192.1-201ENST00000517740 490 ntBASIC24.72■■□□□ 1.55
PTCRAQ6ISU1 MIR6722-201ENST00000617286 78 ntBASIC24.72■■□□□ 1.55
PTCRAQ6ISU1 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC24.72■■□□□ 1.55
PTCRAQ6ISU1 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC24.71■■□□□ 1.55
PTCRAQ6ISU1 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
PTCRAQ6ISU1 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC24.71■■□□□ 1.55
PTCRAQ6ISU1 BX255925.1-201ENST00000566954 1854 ntBASIC24.7■■□□□ 1.55
PTCRAQ6ISU1 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
PTCRAQ6ISU1 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
PTCRAQ6ISU1 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
PTCRAQ6ISU1 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PTCRAQ6ISU1 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
PTCRAQ6ISU1 SNX5-217ENST00000606557 1087 ntBASIC24.69■■□□□ 1.54
PTCRAQ6ISU1 RARRES2P11-201ENST00000635158 484 ntBASIC24.69■■□□□ 1.54
PTCRAQ6ISU1 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
PTCRAQ6ISU1 PROC-203ENST00000409048 1586 ntTSL 5 BASIC24.68■■□□□ 1.54
PTCRAQ6ISU1 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PTCRAQ6ISU1 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
PTCRAQ6ISU1 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
PTCRAQ6ISU1 SSSCA1-AS1-201ENST00000567594 614 ntBASIC24.68■■□□□ 1.54
PTCRAQ6ISU1 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC24.68■■□□□ 1.54
PTCRAQ6ISU1 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PTCRAQ6ISU1 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC24.67■■□□□ 1.54
PTCRAQ6ISU1 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PTCRAQ6ISU1 AC004448.1-201ENST00000458332 883 ntBASIC24.67■■□□□ 1.54
PTCRAQ6ISU1 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC24.67■■□□□ 1.54
PTCRAQ6ISU1 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PTCRAQ6ISU1 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PTCRAQ6ISU1 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
PTCRAQ6ISU1 GATM-206ENST00000558336 1522 ntTSL 2 BASIC24.66■■□□□ 1.54
PTCRAQ6ISU1 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
PTCRAQ6ISU1 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PTCRAQ6ISU1 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC24.65■■□□□ 1.54
PTCRAQ6ISU1 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
PTCRAQ6ISU1 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC24.65■■□□□ 1.54
PTCRAQ6ISU1 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
PTCRAQ6ISU1 DUX4L19-201ENST00000557448 1267 ntBASIC24.65■■□□□ 1.54
PTCRAQ6ISU1 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PTCRAQ6ISU1 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
PTCRAQ6ISU1 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
PTCRAQ6ISU1 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
PTCRAQ6ISU1 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
PTCRAQ6ISU1 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC24.64■■□□□ 1.54
PTCRAQ6ISU1 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
PTCRAQ6ISU1 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC24.64■■□□□ 1.54
PTCRAQ6ISU1 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC24.64■■□□□ 1.54
PTCRAQ6ISU1 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC24.64■■□□□ 1.54
PTCRAQ6ISU1 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC24.64■■□□□ 1.53
PTCRAQ6ISU1 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
PTCRAQ6ISU1 CA15P2-201ENST00000611168 834 ntBASIC24.63■■□□□ 1.53
PTCRAQ6ISU1 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
PTCRAQ6ISU1 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
PTCRAQ6ISU1 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
PTCRAQ6ISU1 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
PTCRAQ6ISU1 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC24.62■■□□□ 1.53
PTCRAQ6ISU1 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
PTCRAQ6ISU1 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC24.62■■□□□ 1.53
PTCRAQ6ISU1 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms