Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 KRT18P10-201ENST00000388836 1287 ntBASIC16.19■□□□□ 0.18
VPS13DQ5THJ4 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VPS13DQ5THJ4 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC16.19■□□□□ 0.18
VPS13DQ5THJ4 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC16.19■□□□□ 0.18
VPS13DQ5THJ4 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC16.19■□□□□ 0.18
VPS13DQ5THJ4 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VPS13DQ5THJ4 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VPS13DQ5THJ4 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
VPS13DQ5THJ4 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
VPS13DQ5THJ4 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
VPS13DQ5THJ4 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
VPS13DQ5THJ4 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VPS13DQ5THJ4 EBPL-204ENST00000378272 766 ntTSL 3 BASIC16.18■□□□□ 0.18
VPS13DQ5THJ4 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VPS13DQ5THJ4 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VPS13DQ5THJ4 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC16.18■□□□□ 0.18
VPS13DQ5THJ4 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC16.17■□□□□ 0.18
VPS13DQ5THJ4 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VPS13DQ5THJ4 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VPS13DQ5THJ4 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC16.17■□□□□ 0.18
VPS13DQ5THJ4 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC16.17■□□□□ 0.18
VPS13DQ5THJ4 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC16.17■□□□□ 0.18
VPS13DQ5THJ4 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
VPS13DQ5THJ4 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VPS13DQ5THJ4 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC16.16■□□□□ 0.18
VPS13DQ5THJ4 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VPS13DQ5THJ4 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
VPS13DQ5THJ4 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
VPS13DQ5THJ4 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VPS13DQ5THJ4 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VPS13DQ5THJ4 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
VPS13DQ5THJ4 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VPS13DQ5THJ4 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VPS13DQ5THJ4 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
VPS13DQ5THJ4 TFPT-201ENST00000391757 774 ntTSL 5 BASIC16.15■□□□□ 0.18
VPS13DQ5THJ4 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
VPS13DQ5THJ4 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC16.15■□□□□ 0.18
VPS13DQ5THJ4 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VPS13DQ5THJ4 GUK1-205ENST00000366722 850 ntTSL 3 BASIC16.15■□□□□ 0.18
VPS13DQ5THJ4 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC16.15■□□□□ 0.18
VPS13DQ5THJ4 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
VPS13DQ5THJ4 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
VPS13DQ5THJ4 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
VPS13DQ5THJ4 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
VPS13DQ5THJ4 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
VPS13DQ5THJ4 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VPS13DQ5THJ4 CLTA-206ENST00000466396 695 ntTSL 2 BASIC16.14■□□□□ 0.17
VPS13DQ5THJ4 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
VPS13DQ5THJ4 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC16.14■□□□□ 0.17
VPS13DQ5THJ4 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
VPS13DQ5THJ4 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VPS13DQ5THJ4 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC16.14■□□□□ 0.17
VPS13DQ5THJ4 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VPS13DQ5THJ4 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VPS13DQ5THJ4 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC16.13■□□□□ 0.17
VPS13DQ5THJ4 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VPS13DQ5THJ4 CD72-202ENST00000378430 585 ntTSL 3 BASIC16.13■□□□□ 0.17
VPS13DQ5THJ4 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
VPS13DQ5THJ4 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC16.13■□□□□ 0.17
VPS13DQ5THJ4 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC16.13■□□□□ 0.17
VPS13DQ5THJ4 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
VPS13DQ5THJ4 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC16.13■□□□□ 0.17
VPS13DQ5THJ4 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VPS13DQ5THJ4 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VPS13DQ5THJ4 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
VPS13DQ5THJ4 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
VPS13DQ5THJ4 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
VPS13DQ5THJ4 UNC93B3-201ENST00000308076 687 ntBASIC16.12■□□□□ 0.17
VPS13DQ5THJ4 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
VPS13DQ5THJ4 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VPS13DQ5THJ4 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC16.12■□□□□ 0.17
VPS13DQ5THJ4 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
VPS13DQ5THJ4 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VPS13DQ5THJ4 AC024257.2-201ENST00000549699 147 ntBASIC16.11■□□□□ 0.17
VPS13DQ5THJ4 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC16.11■□□□□ 0.17
VPS13DQ5THJ4 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VPS13DQ5THJ4 AC142472.1-201ENST00000612013 1741 ntBASIC16.11■□□□□ 0.17
VPS13DQ5THJ4 EXOG-217ENST00000630638 197 ntTSL 5 BASIC16.11■□□□□ 0.17
VPS13DQ5THJ4 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VPS13DQ5THJ4 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
VPS13DQ5THJ4 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
VPS13DQ5THJ4 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VPS13DQ5THJ4 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
VPS13DQ5THJ4 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC16.1■□□□□ 0.17
VPS13DQ5THJ4 SNX5-217ENST00000606557 1087 ntBASIC16.1■□□□□ 0.17
VPS13DQ5THJ4 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC16.1■□□□□ 0.17
VPS13DQ5THJ4 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VPS13DQ5THJ4 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VPS13DQ5THJ4 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VPS13DQ5THJ4 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC16.1■□□□□ 0.17
VPS13DQ5THJ4 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
VPS13DQ5THJ4 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
VPS13DQ5THJ4 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
VPS13DQ5THJ4 MIR5787-201ENST00000611784 55 ntBASIC16.09■□□□□ 0.17
VPS13DQ5THJ4 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
VPS13DQ5THJ4 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
VPS13DQ5THJ4 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC16.09■□□□□ 0.17
VPS13DQ5THJ4 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
VPS13DQ5THJ4 PLD4-205ENST00000553861 667 ntTSL 2 BASIC16.08■□□□□ 0.17
VPS13DQ5THJ4 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms