Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHRFAM7AQ494W8 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHRFAM7AQ494W8 AL359258.2-201ENST00000564063 1566 ntBASIC20.42■□□□□ 0.86
CHRFAM7AQ494W8 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CHRFAM7AQ494W8 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.41■□□□□ 0.86
CHRFAM7AQ494W8 GUSBP5-201ENST00000418136 578 ntBASIC20.41■□□□□ 0.86
CHRFAM7AQ494W8 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CHRFAM7AQ494W8 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHRFAM7AQ494W8 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.41■□□□□ 0.86
CHRFAM7AQ494W8 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHRFAM7AQ494W8 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHRFAM7AQ494W8 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHRFAM7AQ494W8 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CHRFAM7AQ494W8 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHRFAM7AQ494W8 MIR6765-201ENST00000614092 87 ntBASIC20.4■□□□□ 0.86
CHRFAM7AQ494W8 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CHRFAM7AQ494W8 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CHRFAM7AQ494W8 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CHRFAM7AQ494W8 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CHRFAM7AQ494W8 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.39■□□□□ 0.86
CHRFAM7AQ494W8 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CHRFAM7AQ494W8 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.39■□□□□ 0.85
CHRFAM7AQ494W8 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.39■□□□□ 0.85
CHRFAM7AQ494W8 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CHRFAM7AQ494W8 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHRFAM7AQ494W8 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.39■□□□□ 0.85
CHRFAM7AQ494W8 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.39■□□□□ 0.85
CHRFAM7AQ494W8 AC093536.1-201ENST00000569153 554 ntBASIC20.39■□□□□ 0.85
CHRFAM7AQ494W8 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CHRFAM7AQ494W8 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CHRFAM7AQ494W8 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CHRFAM7AQ494W8 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.39■□□□□ 0.85
CHRFAM7AQ494W8 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.38■□□□□ 0.85
CHRFAM7AQ494W8 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.38■□□□□ 0.85
CHRFAM7AQ494W8 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.38■□□□□ 0.85
CHRFAM7AQ494W8 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHRFAM7AQ494W8 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.38■□□□□ 0.85
CHRFAM7AQ494W8 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.38■□□□□ 0.85
CHRFAM7AQ494W8 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHRFAM7AQ494W8 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHRFAM7AQ494W8 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.38■□□□□ 0.85
CHRFAM7AQ494W8 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHRFAM7AQ494W8 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHRFAM7AQ494W8 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.38■□□□□ 0.85
CHRFAM7AQ494W8 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHRFAM7AQ494W8 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CHRFAM7AQ494W8 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CHRFAM7AQ494W8 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHRFAM7AQ494W8 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHRFAM7AQ494W8 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CHRFAM7AQ494W8 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.37■□□□□ 0.85
CHRFAM7AQ494W8 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CHRFAM7AQ494W8 AC022211.4-201ENST00000625094 2161 ntBASIC20.36■□□□□ 0.85
CHRFAM7AQ494W8 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHRFAM7AQ494W8 AC025884.2-201ENST00000553429 711 ntBASIC20.36■□□□□ 0.85
CHRFAM7AQ494W8 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHRFAM7AQ494W8 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.36■□□□□ 0.85
CHRFAM7AQ494W8 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CHRFAM7AQ494W8 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CHRFAM7AQ494W8 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHRFAM7AQ494W8 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CHRFAM7AQ494W8 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.35■□□□□ 0.85
CHRFAM7AQ494W8 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CHRFAM7AQ494W8 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.35■□□□□ 0.85
CHRFAM7AQ494W8 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHRFAM7AQ494W8 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHRFAM7AQ494W8 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHRFAM7AQ494W8 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.35■□□□□ 0.85
CHRFAM7AQ494W8 AC103834.1-201ENST00000520383 144 ntBASIC20.35■□□□□ 0.85
CHRFAM7AQ494W8 AC018755.3-202ENST00000596210 929 ntBASIC20.35■□□□□ 0.85
CHRFAM7AQ494W8 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.35■□□□□ 0.85
CHRFAM7AQ494W8 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.35■□□□□ 0.85
CHRFAM7AQ494W8 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.35■□□□□ 0.85
CHRFAM7AQ494W8 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.35■□□□□ 0.85
CHRFAM7AQ494W8 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHRFAM7AQ494W8 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHRFAM7AQ494W8 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
CHRFAM7AQ494W8 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.34■□□□□ 0.85
CHRFAM7AQ494W8 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CHRFAM7AQ494W8 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHRFAM7AQ494W8 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHRFAM7AQ494W8 SPCS2P3-201ENST00000500401 656 ntBASIC20.34■□□□□ 0.85
CHRFAM7AQ494W8 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHRFAM7AQ494W8 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHRFAM7AQ494W8 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CHRFAM7AQ494W8 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CHRFAM7AQ494W8 RAP2CP1-202ENST00000605179 643 ntBASIC20.34■□□□□ 0.85
CHRFAM7AQ494W8 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHRFAM7AQ494W8 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHRFAM7AQ494W8 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CHRFAM7AQ494W8 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CHRFAM7AQ494W8 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.33■□□□□ 0.85
CHRFAM7AQ494W8 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.33■□□□□ 0.85
CHRFAM7AQ494W8 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CHRFAM7AQ494W8 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.33■□□□□ 0.85
CHRFAM7AQ494W8 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CHRFAM7AQ494W8 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
CHRFAM7AQ494W8 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.33■□□□□ 0.85
CHRFAM7AQ494W8 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CHRFAM7AQ494W8 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms