Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.67■■□□□ 1.06
PER3P56645 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PER3P56645 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PER3P56645 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.67■■□□□ 1.06
PER3P56645 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.66■■□□□ 1.06
PER3P56645 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
PER3P56645 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PER3P56645 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PER3P56645 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PER3P56645 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.66■■□□□ 1.06
PER3P56645 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.66■■□□□ 1.06
PER3P56645 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PER3P56645 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PER3P56645 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PER3P56645 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.65■■□□□ 1.06
PER3P56645 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PER3P56645 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
PER3P56645 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PER3P56645 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
PER3P56645 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
PER3P56645 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
PER3P56645 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
PER3P56645 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.64■■□□□ 1.05
PER3P56645 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PER3P56645 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
PER3P56645 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PER3P56645 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.63■■□□□ 1.05
PER3P56645 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.63■■□□□ 1.05
PER3P56645 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
PER3P56645 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PER3P56645 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PER3P56645 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PER3P56645 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
PER3P56645 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PER3P56645 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
PER3P56645 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
PER3P56645 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.62■■□□□ 1.05
PER3P56645 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.62■■□□□ 1.05
PER3P56645 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.62■■□□□ 1.05
PER3P56645 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.62■■□□□ 1.05
PER3P56645 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
PER3P56645 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PER3P56645 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PER3P56645 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
PER3P56645 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PER3P56645 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PER3P56645 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.61■■□□□ 1.05
PER3P56645 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PER3P56645 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
PER3P56645 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PER3P56645 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PER3P56645 AC020928.2-201ENST00000588717 2197 ntBASIC21.61■■□□□ 1.05
PER3P56645 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
PER3P56645 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PER3P56645 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PER3P56645 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.6■■□□□ 1.05
PER3P56645 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.6■■□□□ 1.05
PER3P56645 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.6■■□□□ 1.05
PER3P56645 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PER3P56645 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
PER3P56645 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PER3P56645 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
PER3P56645 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PER3P56645 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PER3P56645 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PER3P56645 MIR638-201ENST00000385237 100 ntBASIC21.59■■□□□ 1.05
PER3P56645 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PER3P56645 UNC93B8-201ENST00000511903 705 ntBASIC21.59■■□□□ 1.05
PER3P56645 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PER3P56645 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
PER3P56645 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
PER3P56645 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
PER3P56645 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PER3P56645 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PER3P56645 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
PER3P56645 AL139246.5-201ENST00000606645 996 ntBASIC21.57■■□□□ 1.04
PER3P56645 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PER3P56645 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
PER3P56645 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.56■■□□□ 1.04
PER3P56645 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PER3P56645 AC142472.1-201ENST00000612013 1741 ntBASIC21.56■■□□□ 1.04
PER3P56645 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.56■■□□□ 1.04
PER3P56645 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.56■■□□□ 1.04
PER3P56645 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.56■■□□□ 1.04
PER3P56645 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PER3P56645 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PER3P56645 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PER3P56645 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PER3P56645 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PER3P56645 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.55■■□□□ 1.04
PER3P56645 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PER3P56645 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PER3P56645 KRT18P24-201ENST00000344739 1156 ntBASIC21.55■■□□□ 1.04
PER3P56645 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PER3P56645 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.55■■□□□ 1.04
PER3P56645 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
PER3P56645 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PER3P56645 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PER3P56645 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
PER3P56645 AP004609.3-201ENST00000610705 1884 ntBASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms