Protein–RNA interactions for Protein: P50750

CDK9, Cyclin-dependent kinase 9, humanhuman

Known RBP Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9P50750 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC22.57■■□□□ 1.2
CDK9P50750 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC22.57■■□□□ 1.2
CDK9P50750 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CDK9P50750 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
CDK9P50750 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CDK9P50750 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
CDK9P50750 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CDK9P50750 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
CDK9P50750 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
CDK9P50750 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
CDK9P50750 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CDK9P50750 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
CDK9P50750 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDK9P50750 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CDK9P50750 AC142381.3-201ENST00000568208 1670 ntBASIC22.55■■□□□ 1.2
CDK9P50750 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC22.55■■□□□ 1.2
CDK9P50750 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC22.55■■□□□ 1.2
CDK9P50750 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC22.55■■□□□ 1.2
CDK9P50750 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDK9P50750 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC22.55■■□□□ 1.2
CDK9P50750 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDK9P50750 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
CDK9P50750 MED17-227ENST00000640521 2047 ntTSL 5 BASIC22.55■■□□□ 1.2
CDK9P50750 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CDK9P50750 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDK9P50750 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
CDK9P50750 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CDK9P50750 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CDK9P50750 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC22.54■■□□□ 1.2
CDK9P50750 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC22.54■■□□□ 1.2
CDK9P50750 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC22.54■■□□□ 1.2
CDK9P50750 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CDK9P50750 AL139125.2-201ENST00000623134 1869 ntBASIC22.54■■□□□ 1.2
CDK9P50750 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
CDK9P50750 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
CDK9P50750 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CDK9P50750 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC22.52■■□□□ 1.2
CDK9P50750 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC22.52■■□□□ 1.2
CDK9P50750 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC22.52■■□□□ 1.2
CDK9P50750 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CDK9P50750 RP9P-202ENST00000450133 1212 ntBASIC22.52■■□□□ 1.2
CDK9P50750 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CDK9P50750 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
CDK9P50750 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC22.51■■□□□ 1.19
CDK9P50750 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC22.51■■□□□ 1.19
CDK9P50750 AC093536.1-201ENST00000569153 554 ntBASIC22.51■■□□□ 1.19
CDK9P50750 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC22.51■■□□□ 1.19
CDK9P50750 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CDK9P50750 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CDK9P50750 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CDK9P50750 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CDK9P50750 AC007029.1-201ENST00000604183 313 ntBASIC22.5■■□□□ 1.19
CDK9P50750 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC22.5■■□□□ 1.19
CDK9P50750 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
CDK9P50750 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CDK9P50750 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC22.49■■□□□ 1.19
CDK9P50750 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC22.49■■□□□ 1.19
CDK9P50750 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CDK9P50750 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CDK9P50750 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC22.49■■□□□ 1.19
CDK9P50750 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CDK9P50750 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC22.49■■□□□ 1.19
CDK9P50750 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC22.49■■□□□ 1.19
CDK9P50750 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CDK9P50750 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
CDK9P50750 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CDK9P50750 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CDK9P50750 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CDK9P50750 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CDK9P50750 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC22.48■■□□□ 1.19
CDK9P50750 CASK-201ENST00000378154 2494 ntTSL 5 BASIC22.48■■□□□ 1.19
CDK9P50750 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CDK9P50750 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC22.47■■□□□ 1.19
CDK9P50750 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CDK9P50750 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CDK9P50750 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC22.47■■□□□ 1.19
CDK9P50750 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CDK9P50750 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CDK9P50750 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CDK9P50750 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CDK9P50750 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
CDK9P50750 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
CDK9P50750 AC097639.1-201ENST00000565519 1891 ntBASIC22.46■■□□□ 1.19
CDK9P50750 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
CDK9P50750 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
CDK9P50750 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC22.46■■□□□ 1.19
CDK9P50750 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC22.46■■□□□ 1.19
CDK9P50750 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CDK9P50750 AC022211.4-201ENST00000625094 2161 ntBASIC22.45■■□□□ 1.18
CDK9P50750 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
CDK9P50750 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CDK9P50750 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CDK9P50750 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CDK9P50750 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CDK9P50750 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
CDK9P50750 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CDK9P50750 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CDK9P50750 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
CDK9P50750 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CDK9P50750 HYI-213ENST00000583037 1322 ntTSL 5 BASIC22.44■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms