Protein–RNA interactions for Protein: P08294

SOD3, Extracellular superoxide dismutase [Cu-Zn], humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD3P08294 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.35■□□□□ 0.85
SOD3P08294 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SOD3P08294 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.35■□□□□ 0.85
SOD3P08294 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.35■□□□□ 0.85
SOD3P08294 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SOD3P08294 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SOD3P08294 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SOD3P08294 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SOD3P08294 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SOD3P08294 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
SOD3P08294 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SOD3P08294 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.34■□□□□ 0.85
SOD3P08294 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SOD3P08294 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SOD3P08294 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SOD3P08294 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
SOD3P08294 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.33■□□□□ 0.85
SOD3P08294 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
SOD3P08294 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.32■□□□□ 0.84
SOD3P08294 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.32■□□□□ 0.84
SOD3P08294 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.32■□□□□ 0.84
SOD3P08294 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SOD3P08294 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
SOD3P08294 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
SOD3P08294 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.31■□□□□ 0.84
SOD3P08294 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.31■□□□□ 0.84
SOD3P08294 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.31■□□□□ 0.84
SOD3P08294 KRT16P3-201ENST00000439127 1283 ntBASIC20.31■□□□□ 0.84
SOD3P08294 TSPY9P-201ENST00000440215 945 ntBASIC20.31■□□□□ 0.84
SOD3P08294 TSPY11P-201ENST00000442607 1045 ntBASIC20.31■□□□□ 0.84
SOD3P08294 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.31■□□□□ 0.84
SOD3P08294 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SOD3P08294 AC021242.3-201ENST00000607598 1377 ntBASIC20.31■□□□□ 0.84
SOD3P08294 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SOD3P08294 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.3■□□□□ 0.84
SOD3P08294 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
SOD3P08294 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SOD3P08294 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.3■□□□□ 0.84
SOD3P08294 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SOD3P08294 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
SOD3P08294 AC008406.3-201ENST00000620001 1374 ntBASIC20.3■□□□□ 0.84
SOD3P08294 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SOD3P08294 AC019069.1-201ENST00000610008 1333 ntBASIC20.29■□□□□ 0.84
SOD3P08294 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
SOD3P08294 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
SOD3P08294 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SOD3P08294 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SOD3P08294 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SOD3P08294 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SOD3P08294 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SOD3P08294 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.28■□□□□ 0.84
SOD3P08294 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SOD3P08294 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.28■□□□□ 0.84
SOD3P08294 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.28■□□□□ 0.84
SOD3P08294 MIR4281-201ENST00000580852 62 ntBASIC20.28■□□□□ 0.84
SOD3P08294 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.28■□□□□ 0.84
SOD3P08294 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
SOD3P08294 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC20.27■□□□□ 0.84
SOD3P08294 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SOD3P08294 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.27■□□□□ 0.84
SOD3P08294 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.27■□□□□ 0.84
SOD3P08294 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.27■□□□□ 0.84
SOD3P08294 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SOD3P08294 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SOD3P08294 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SOD3P08294 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.27■□□□□ 0.83
SOD3P08294 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SOD3P08294 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
SOD3P08294 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SOD3P08294 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
SOD3P08294 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SOD3P08294 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SOD3P08294 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SOD3P08294 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SOD3P08294 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SOD3P08294 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.25■□□□□ 0.83
SOD3P08294 AC092028.1-203ENST00000608262 953 ntBASIC20.25■□□□□ 0.83
SOD3P08294 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SOD3P08294 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SOD3P08294 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SOD3P08294 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SOD3P08294 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
SOD3P08294 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SOD3P08294 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
SOD3P08294 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
SOD3P08294 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.24■□□□□ 0.83
SOD3P08294 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.24■□□□□ 0.83
SOD3P08294 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SOD3P08294 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SOD3P08294 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SOD3P08294 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SOD3P08294 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
SOD3P08294 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SOD3P08294 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
SOD3P08294 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SOD3P08294 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.23■□□□□ 0.83
SOD3P08294 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.23■□□□□ 0.83
SOD3P08294 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SOD3P08294 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SOD3P08294 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms