Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
MT-ND3P03897 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC23.88■■□□□ 1.41
MT-ND3P03897 SLC6A10P-202ENST00000431994 2058 ntBASIC23.88■■□□□ 1.41
MT-ND3P03897 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
MT-ND3P03897 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.87■■□□□ 1.41
MT-ND3P03897 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
MT-ND3P03897 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
MT-ND3P03897 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
MT-ND3P03897 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.87■■□□□ 1.41
MT-ND3P03897 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
MT-ND3P03897 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
MT-ND3P03897 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC23.87■■□□□ 1.41
MT-ND3P03897 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
MT-ND3P03897 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
MT-ND3P03897 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
MT-ND3P03897 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
MT-ND3P03897 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC23.86■■□□□ 1.41
MT-ND3P03897 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
MT-ND3P03897 HYI-213ENST00000583037 1322 ntTSL 5 BASIC23.85■■□□□ 1.41
MT-ND3P03897 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
MT-ND3P03897 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
MT-ND3P03897 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC23.85■■□□□ 1.41
MT-ND3P03897 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
MT-ND3P03897 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
MT-ND3P03897 MED25-210ENST00000612854 801 ntTSL 5 BASIC23.84■■□□□ 1.41
MT-ND3P03897 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
MT-ND3P03897 MED25-214ENST00000622402 642 ntTSL 5 BASIC23.84■■□□□ 1.41
MT-ND3P03897 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
MT-ND3P03897 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
MT-ND3P03897 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.84■■□□□ 1.41
MT-ND3P03897 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
MT-ND3P03897 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
MT-ND3P03897 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC23.83■■□□□ 1.41
MT-ND3P03897 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
MT-ND3P03897 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
MT-ND3P03897 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.4
MT-ND3P03897 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
MT-ND3P03897 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
MT-ND3P03897 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.4
MT-ND3P03897 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC23.83■■□□□ 1.4
MT-ND3P03897 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
MT-ND3P03897 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
MT-ND3P03897 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC23.82■■□□□ 1.4
MT-ND3P03897 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
MT-ND3P03897 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
MT-ND3P03897 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
MT-ND3P03897 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC23.82■■□□□ 1.4
MT-ND3P03897 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
MT-ND3P03897 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
MT-ND3P03897 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.81■■□□□ 1.4
MT-ND3P03897 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
MT-ND3P03897 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
MT-ND3P03897 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC23.81■■□□□ 1.4
MT-ND3P03897 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
MT-ND3P03897 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
MT-ND3P03897 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
MT-ND3P03897 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
MT-ND3P03897 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC23.8■■□□□ 1.4
MT-ND3P03897 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
MT-ND3P03897 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
MT-ND3P03897 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
MT-ND3P03897 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
MT-ND3P03897 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
MT-ND3P03897 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
MT-ND3P03897 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
MT-ND3P03897 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
MT-ND3P03897 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
MT-ND3P03897 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
MT-ND3P03897 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
MT-ND3P03897 LINC00543-201ENST00000567234 1845 ntBASIC23.79■■□□□ 1.4
MT-ND3P03897 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
MT-ND3P03897 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
MT-ND3P03897 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
MT-ND3P03897 U85056.1-201ENST00000616429 682 ntBASIC23.78■■□□□ 1.4
MT-ND3P03897 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
MT-ND3P03897 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
MT-ND3P03897 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
MT-ND3P03897 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
MT-ND3P03897 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC23.77■■□□□ 1.4
MT-ND3P03897 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC23.77■■□□□ 1.4
MT-ND3P03897 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
MT-ND3P03897 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
MT-ND3P03897 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC23.77■■□□□ 1.4
MT-ND3P03897 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
MT-ND3P03897 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
MT-ND3P03897 REST-210ENST00000638187 1334 ntTSL 5 BASIC23.77■■□□□ 1.4
MT-ND3P03897 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
MT-ND3P03897 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC23.77■■□□□ 1.4
MT-ND3P03897 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC23.76■■□□□ 1.39
MT-ND3P03897 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
MT-ND3P03897 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.76■■□□□ 1.39
MT-ND3P03897 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
MT-ND3P03897 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
MT-ND3P03897 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
MT-ND3P03897 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC23.76■■□□□ 1.39
MT-ND3P03897 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
MT-ND3P03897 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
MT-ND3P03897 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
MT-ND3P03897 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
MT-ND3P03897 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms