Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.08■□□□□ 0.97
CLDN1O95832 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.96
CLDN1O95832 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CLDN1O95832 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLDN1O95832 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.07■□□□□ 0.96
CLDN1O95832 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.07■□□□□ 0.96
CLDN1O95832 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.07■□□□□ 0.96
CLDN1O95832 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.07■□□□□ 0.96
CLDN1O95832 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CLDN1O95832 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLDN1O95832 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CLDN1O95832 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLDN1O95832 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLDN1O95832 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLDN1O95832 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLDN1O95832 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CLDN1O95832 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLDN1O95832 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CLDN1O95832 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
CLDN1O95832 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.05■□□□□ 0.96
CLDN1O95832 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.05■□□□□ 0.96
CLDN1O95832 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.05■□□□□ 0.96
CLDN1O95832 AL031432.3-201ENST00000607698 485 ntBASIC21.05■□□□□ 0.96
CLDN1O95832 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLDN1O95832 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLDN1O95832 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CLDN1O95832 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLDN1O95832 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CLDN1O95832 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
CLDN1O95832 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CLDN1O95832 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.04■□□□□ 0.96
CLDN1O95832 SUDS3P1-201ENST00000505831 966 ntBASIC21.04■□□□□ 0.96
CLDN1O95832 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.04■□□□□ 0.96
CLDN1O95832 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC21.04■□□□□ 0.96
CLDN1O95832 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLDN1O95832 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLDN1O95832 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CLDN1O95832 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.03■□□□□ 0.96
CLDN1O95832 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CLDN1O95832 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.03■□□□□ 0.96
CLDN1O95832 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CLDN1O95832 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.03■□□□□ 0.96
CLDN1O95832 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLDN1O95832 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLDN1O95832 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC21.02■□□□□ 0.96
CLDN1O95832 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CLDN1O95832 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.02■□□□□ 0.96
CLDN1O95832 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CLDN1O95832 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.02■□□□□ 0.96
CLDN1O95832 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLDN1O95832 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.95
CLDN1O95832 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLDN1O95832 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLDN1O95832 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.01■□□□□ 0.95
CLDN1O95832 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLDN1O95832 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLDN1O95832 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLDN1O95832 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLDN1O95832 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CLDN1O95832 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21■□□□□ 0.95
CLDN1O95832 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CLDN1O95832 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21■□□□□ 0.95
CLDN1O95832 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21■□□□□ 0.95
CLDN1O95832 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21■□□□□ 0.95
CLDN1O95832 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21■□□□□ 0.95
CLDN1O95832 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21■□□□□ 0.95
CLDN1O95832 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21■□□□□ 0.95
CLDN1O95832 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CLDN1O95832 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CLDN1O95832 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CLDN1O95832 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLDN1O95832 PROC-203ENST00000409048 1586 ntTSL 5 BASIC20.99■□□□□ 0.95
CLDN1O95832 UNC93B3-201ENST00000308076 687 ntBASIC20.99■□□□□ 0.95
CLDN1O95832 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CLDN1O95832 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CLDN1O95832 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLDN1O95832 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLDN1O95832 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.98■□□□□ 0.95
CLDN1O95832 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CLDN1O95832 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLDN1O95832 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLDN1O95832 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLDN1O95832 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.97■□□□□ 0.95
CLDN1O95832 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.97■□□□□ 0.95
CLDN1O95832 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CLDN1O95832 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.97■□□□□ 0.95
CLDN1O95832 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLDN1O95832 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
CLDN1O95832 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLDN1O95832 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CLDN1O95832 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.96■□□□□ 0.95
CLDN1O95832 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLDN1O95832 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CLDN1O95832 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLDN1O95832 AL136162.1-201ENST00000607711 1078 ntBASIC20.96■□□□□ 0.95
CLDN1O95832 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.96■□□□□ 0.95
CLDN1O95832 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
CLDN1O95832 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLDN1O95832 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLDN1O95832 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms