Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ABCA1O95477 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC19.77■□□□□ 0.76
ABCA1O95477 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
ABCA1O95477 AL356740.2-201ENST00000601559 647 ntBASIC19.77■□□□□ 0.75
ABCA1O95477 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
ABCA1O95477 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
ABCA1O95477 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
ABCA1O95477 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ABCA1O95477 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.76■□□□□ 0.75
ABCA1O95477 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ABCA1O95477 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
ABCA1O95477 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ABCA1O95477 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
ABCA1O95477 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ABCA1O95477 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ABCA1O95477 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ABCA1O95477 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.75■□□□□ 0.75
ABCA1O95477 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.75■□□□□ 0.75
ABCA1O95477 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
ABCA1O95477 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ABCA1O95477 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.75■□□□□ 0.75
ABCA1O95477 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ABCA1O95477 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
ABCA1O95477 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.75■□□□□ 0.75
ABCA1O95477 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ABCA1O95477 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ABCA1O95477 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ABCA1O95477 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ABCA1O95477 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ABCA1O95477 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.73■□□□□ 0.75
ABCA1O95477 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.73■□□□□ 0.75
ABCA1O95477 AC096631.2-201ENST00000436136 790 ntBASIC19.73■□□□□ 0.75
ABCA1O95477 AC133561.4-201ENST00000566112 224 ntBASIC19.73■□□□□ 0.75
ABCA1O95477 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
ABCA1O95477 MIR6724-1-201ENST00000616420 92 ntBASIC19.73■□□□□ 0.75
ABCA1O95477 MIR6724-2-201ENST00000616483 92 ntBASIC19.73■□□□□ 0.75
ABCA1O95477 MIR6724-4-201ENST00000617390 92 ntBASIC19.73■□□□□ 0.75
ABCA1O95477 MIR6724-3-201ENST00000622482 92 ntBASIC19.73■□□□□ 0.75
ABCA1O95477 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC19.73■□□□□ 0.75
ABCA1O95477 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ABCA1O95477 ZNRF2P3-201ENST00000424200 374 ntBASIC19.73■□□□□ 0.75
ABCA1O95477 SUDS3P1-201ENST00000505831 966 ntBASIC19.73■□□□□ 0.75
ABCA1O95477 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ABCA1O95477 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ABCA1O95477 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ABCA1O95477 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ABCA1O95477 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ABCA1O95477 AC010997.5-201ENST00000609182 354 ntBASIC19.72■□□□□ 0.75
ABCA1O95477 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.72■□□□□ 0.75
ABCA1O95477 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC19.72■□□□□ 0.75
ABCA1O95477 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ABCA1O95477 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC19.72■□□□□ 0.75
ABCA1O95477 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.72■□□□□ 0.75
ABCA1O95477 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.72■□□□□ 0.75
ABCA1O95477 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ABCA1O95477 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC19.71■□□□□ 0.75
ABCA1O95477 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ABCA1O95477 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC19.71■□□□□ 0.75
ABCA1O95477 AL512631.2-201ENST00000604634 923 ntBASIC19.71■□□□□ 0.75
ABCA1O95477 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
ABCA1O95477 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.71■□□□□ 0.75
ABCA1O95477 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC19.71■□□□□ 0.75
ABCA1O95477 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ABCA1O95477 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
ABCA1O95477 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC19.7■□□□□ 0.74
ABCA1O95477 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
ABCA1O95477 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ABCA1O95477 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
ABCA1O95477 AC026271.2-201ENST00000428091 497 ntBASIC19.7■□□□□ 0.74
ABCA1O95477 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.7■□□□□ 0.74
ABCA1O95477 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.69■□□□□ 0.74
ABCA1O95477 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
ABCA1O95477 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ABCA1O95477 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.69■□□□□ 0.74
ABCA1O95477 MTDHP2-201ENST00000601468 714 ntBASIC19.68■□□□□ 0.74
ABCA1O95477 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
ABCA1O95477 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ABCA1O95477 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
ABCA1O95477 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
ABCA1O95477 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ABCA1O95477 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ABCA1O95477 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ABCA1O95477 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.67■□□□□ 0.74
ABCA1O95477 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ABCA1O95477 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.67■□□□□ 0.74
ABCA1O95477 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ABCA1O95477 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ABCA1O95477 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.67■□□□□ 0.74
ABCA1O95477 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.67■□□□□ 0.74
ABCA1O95477 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
ABCA1O95477 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ABCA1O95477 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
ABCA1O95477 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.66■□□□□ 0.74
ABCA1O95477 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ABCA1O95477 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ABCA1O95477 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ABCA1O95477 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ABCA1O95477 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ABCA1O95477 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.65■□□□□ 0.74
ABCA1O95477 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms