Protein–RNA interactions for Protein: O60880

SH2D1A, SH2 domain-containing protein 1A, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D1AO60880 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SH2D1AO60880 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
SH2D1AO60880 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SH2D1AO60880 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SH2D1AO60880 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC17.59■□□□□ 0.41
SH2D1AO60880 MED25-210ENST00000612854 801 ntTSL 5 BASIC17.59■□□□□ 0.41
SH2D1AO60880 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SH2D1AO60880 MED25-214ENST00000622402 642 ntTSL 5 BASIC17.59■□□□□ 0.41
SH2D1AO60880 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC17.59■□□□□ 0.41
SH2D1AO60880 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SH2D1AO60880 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC17.59■□□□□ 0.41
SH2D1AO60880 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SH2D1AO60880 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC17.58■□□□□ 0.41
SH2D1AO60880 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SH2D1AO60880 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SH2D1AO60880 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SH2D1AO60880 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SH2D1AO60880 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SH2D1AO60880 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SH2D1AO60880 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SH2D1AO60880 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SH2D1AO60880 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC17.57■□□□□ 0.4
SH2D1AO60880 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SH2D1AO60880 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SH2D1AO60880 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SH2D1AO60880 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SH2D1AO60880 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SH2D1AO60880 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SH2D1AO60880 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC17.57■□□□□ 0.4
SH2D1AO60880 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SH2D1AO60880 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
SH2D1AO60880 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SH2D1AO60880 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SH2D1AO60880 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SH2D1AO60880 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
SH2D1AO60880 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SH2D1AO60880 DUSP8P5-201ENST00000422884 1815 ntBASIC17.56■□□□□ 0.4
SH2D1AO60880 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SH2D1AO60880 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SH2D1AO60880 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SH2D1AO60880 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
SH2D1AO60880 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SH2D1AO60880 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SH2D1AO60880 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC17.56■□□□□ 0.4
SH2D1AO60880 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC17.56■□□□□ 0.4
SH2D1AO60880 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC17.55■□□□□ 0.4
SH2D1AO60880 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SH2D1AO60880 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SH2D1AO60880 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
SH2D1AO60880 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC17.55■□□□□ 0.4
SH2D1AO60880 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC17.55■□□□□ 0.4
SH2D1AO60880 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC17.55■□□□□ 0.4
SH2D1AO60880 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC17.55■□□□□ 0.4
SH2D1AO60880 DUX4L11-201ENST00000611504 1267 ntBASIC17.55■□□□□ 0.4
SH2D1AO60880 DUX4L12-201ENST00000614593 1267 ntBASIC17.55■□□□□ 0.4
SH2D1AO60880 DUX4L14-201ENST00000621227 1267 ntBASIC17.55■□□□□ 0.4
SH2D1AO60880 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SH2D1AO60880 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SH2D1AO60880 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SH2D1AO60880 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SH2D1AO60880 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SH2D1AO60880 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC17.54■□□□□ 0.4
SH2D1AO60880 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
SH2D1AO60880 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SH2D1AO60880 HES6-205ENST00000409356 528 ntTSL 2 BASIC17.54■□□□□ 0.4
SH2D1AO60880 AC126177.7-201ENST00000547904 679 ntBASIC17.54■□□□□ 0.4
SH2D1AO60880 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC17.54■□□□□ 0.4
SH2D1AO60880 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SH2D1AO60880 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SH2D1AO60880 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SH2D1AO60880 AC004812.2-201ENST00000611079 2094 ntBASIC17.54■□□□□ 0.4
SH2D1AO60880 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
SH2D1AO60880 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
SH2D1AO60880 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SH2D1AO60880 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC17.53■□□□□ 0.4
SH2D1AO60880 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SH2D1AO60880 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SH2D1AO60880 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SH2D1AO60880 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SH2D1AO60880 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SH2D1AO60880 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC17.53■□□□□ 0.4
SH2D1AO60880 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SH2D1AO60880 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SH2D1AO60880 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC17.52■□□□□ 0.4
SH2D1AO60880 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC17.52■□□□□ 0.4
SH2D1AO60880 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC17.52■□□□□ 0.4
SH2D1AO60880 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC17.52■□□□□ 0.4
SH2D1AO60880 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC17.52■□□□□ 0.4
SH2D1AO60880 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC17.51■□□□□ 0.39
SH2D1AO60880 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SH2D1AO60880 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SH2D1AO60880 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC17.51■□□□□ 0.39
SH2D1AO60880 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC17.51■□□□□ 0.39
SH2D1AO60880 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SH2D1AO60880 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SH2D1AO60880 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC17.5■□□□□ 0.39
SH2D1AO60880 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SH2D1AO60880 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SH2D1AO60880 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SH2D1AO60880 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms